BLASTX nr result

ID: Coptis25_contig00041096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041096
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325220.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002524507.1| hypothetical protein RCOM_0224470 [Ricinus c...    72   4e-11
ref|XP_003609345.1| EPIDERMAL PATTERNING FACTOR-like protein [Me...    61   1e-07
ref|XP_004152199.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like ...    58   7e-07
ref|XP_003604388.1| EPIDERMAL PATTERNING FACTOR-like protein [Me...    57   2e-06

>ref|XP_002325220.1| predicted protein [Populus trichocarpa] gi|222866654|gb|EEF03785.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = -2

Query: 231 MASLTNCSKGLSLA-VVILILSPTFLPSEQVLGLVSSSNNNDRALKQKKMMLGSRPPLCV 55
           MAS T+ S G+ +  +VIL  S TFLP    +  + S  + D  +KQKKM+LGSRPP CV
Sbjct: 1   MASATDSSYGIRITFIVILFFSLTFLPPVSAVSSMPSRGSED--MKQKKMVLGSRPPQCV 58

Query: 54  NKCFHCRPCKATLVIPPH 1
           N+C +C+PC A LV PPH
Sbjct: 59  NRCSNCKPCMAALVTPPH 76


>ref|XP_002524507.1| hypothetical protein RCOM_0224470 [Ricinus communis]
           gi|223536295|gb|EEF37947.1| hypothetical protein
           RCOM_0224470 [Ricinus communis]
          Length = 108

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
 Frame = -2

Query: 231 MASLTNCSKGLSLAVVILILSPTFLP---SEQVLGLVSSSNNNDRALKQKKMMLGSRPPL 61
           MASL     GL+   +++++   FLP   S  VL + SS    D   KQ KM+LGSRPP 
Sbjct: 1   MASLAYYPNGLTRIPLVILMFIFFLPFFSSTSVLTVGSSPYLRDNDGKQMKMVLGSRPPQ 60

Query: 60  CVNKCFHCRPCKATLVIPPH 1
           C+N+C +CRPC A LV PPH
Sbjct: 61  CINRCLNCRPCMAALVTPPH 80


>ref|XP_003609345.1| EPIDERMAL PATTERNING FACTOR-like protein [Medicago truncatula]
           gi|355510400|gb|AES91542.1| EPIDERMAL PATTERNING
           FACTOR-like protein [Medicago truncatula]
          Length = 92

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = -2

Query: 102 LKQKKMMLGSRPPLCVNKCFHCRPCKATLVIPPH 1
           + QKK +LGSRPP CVNKC +CRPC ATLVI PH
Sbjct: 24  INQKKSVLGSRPPRCVNKCLNCRPCMATLVISPH 57


>ref|XP_004152199.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 8-like [Cucumis
           sativus] gi|449528391|ref|XP_004171188.1| PREDICTED:
           EPIDERMAL PATTERNING FACTOR-like protein 8-like [Cucumis
           sativus]
          Length = 106

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/77 (40%), Positives = 42/77 (54%)
 Frame = -2

Query: 231 MASLTNCSKGLSLAVVILILSPTFLPSEQVLGLVSSSNNNDRALKQKKMMLGSRPPLCVN 52
           MAS TN    L +AV   ++   FL    + G+    +       QK+ +LGS+PP CV 
Sbjct: 1   MASPTNNLLKLVVAVAFAVVFSLFLSLPTLSGVAEVES------LQKRTVLGSKPPRCVG 54

Query: 51  KCFHCRPCKATLVIPPH 1
           KC +CRPC A LV+P H
Sbjct: 55  KCLNCRPCTAALVVPEH 71


>ref|XP_003604388.1| EPIDERMAL PATTERNING FACTOR-like protein [Medicago truncatula]
           gi|355505443|gb|AES86585.1| EPIDERMAL PATTERNING
           FACTOR-like protein [Medicago truncatula]
          Length = 111

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
 Frame = -2

Query: 204 GLSLAVVILILSPTF---LPSEQVLGLVSSSNNNDRALKQKKMMLGSRPPLCVNKCFHCR 34
           GL LA +I +L   F   L S+    LV   N++   L+ +KM++GS+PP C+NKC +CR
Sbjct: 12  GLKLATIITVLFIFFFCMLFSKSGGSLVLERNDS---LQDRKMVIGSKPPACLNKCMNCR 68

Query: 33  PCKATLVI 10
           PC ATLV+
Sbjct: 69  PCIATLVV 76


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