BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041093
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    76   2e-12
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    72   5e-11
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    71   1e-10
gb|ABF97084.1| retrotransposon protein, putative, unclassified [...    71   1e-10
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ...    71   1e-10

>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/89 (40%), Positives = 54/89 (60%)
 Frame = +2

Query: 2   FSKNMSSDMKTQITHLLNMRPILIGEKYHGSRLFLGENKSDIFSGIISTINKRISGWKSK 181
           +S+ +S   K ++T++LNMR +   EKY G     G +K  IF  +I  I K++ GWK K
Sbjct: 727 YSRGVSVSQKDELTNILNMRQVDRHEKYLGIPSISGRSKKAIFDSLIDRIWKKLQGWKEK 786

Query: 182 LLSQAARTVLIKSITSTIPVYTMNIFLLP 268
           LLS+A + VL+KS+   IP Y M ++  P
Sbjct: 787 LLSRAGKEVLLKSVIQAIPTYLMGVYKFP 815


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/98 (34%), Positives = 59/98 (60%)
 Frame = +2

Query: 2    FSKNMSSDMKTQITHLLNMRPILIGEKYHGSRLFLGENKSDIFSGIISTINKRISGWKSK 181
            FSK +S   K +++++L M+ +    KY G     G +++ IF  ++  I K++ GWK K
Sbjct: 727  FSKGVSIAQKEELSNILQMKQVERHMKYLGIPSITGRSRTAIFDSLMDRIWKKLQGWKEK 786

Query: 182  LLSQAARTVLIKSITSTIPVYTMNIFLLPNNITATINA 295
            LLS+A + +L+KS+   IP Y M ++ LP +I   I++
Sbjct: 787  LLSRAGKEILLKSVIQAIPTYLMGVYKLPCSIIQKIHS 824


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/92 (36%), Positives = 51/92 (55%)
 Frame = +2

Query: 2    FSKNMSSDMKTQITHLLNMRPILIGEKYHGSRLFLGENKSDIFSGIISTINKRISGWKSK 181
            +S+N+  D    +   L  + +   EKY G   F+G +K  +F  I   + K++ GWK K
Sbjct: 732  YSRNLEPDKINTLQMKLAFKTVEGHEKYLGLPTFIGSSKKRVFQAIQDRVWKKLKGWKGK 791

Query: 182  LLSQAARTVLIKSITSTIPVYTMNIFLLPNNI 277
             LSQA R VLIK++   IP Y M  F++P +I
Sbjct: 792  YLSQAGREVLIKAVAQAIPTYAMQCFVIPKSI 823


>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1184

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/97 (37%), Positives = 56/97 (57%)
 Frame = +2

Query: 2   FSKNMSSDMKTQITHLLNMRPILIGEKYHGSRLFLGENKSDIFSGIISTINKRISGWKSK 181
           FS+N + + K  +   L++    + +KY G    +G +KSD F  +I  +N RI+G K K
Sbjct: 541 FSRNTAVEDKAAVCGSLDIMTEALNDKYLGLPAMIGVDKSDCFRHLIDRVNNRINGRKEK 600

Query: 182 LLSQAARTVLIKSITSTIPVYTMNIFLLPNNITATIN 292
           +LS   + VLIKSI   IPV+ M++F +P  I   I+
Sbjct: 601 MLSTGGKEVLIKSIAQAIPVFAMSVFRIPKKICDCIS 637


>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1185

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/97 (37%), Positives = 56/97 (57%)
 Frame = +2

Query: 2   FSKNMSSDMKTQITHLLNMRPILIGEKYHGSRLFLGENKSDIFSGIISTINKRISGWKSK 181
           FS+N + + K  +   L++    + +KY G    +G +KSD F  +I  +N RI+G K K
Sbjct: 541 FSRNTAVEDKAAVCGSLDIMTEALNDKYLGLPAMIGVDKSDCFRHLIDRVNNRINGRKEK 600

Query: 182 LLSQAARTVLIKSITSTIPVYTMNIFLLPNNITATIN 292
           +LS   + VLIKSI   IPV+ M++F +P  I   I+
Sbjct: 601 MLSTGGKEVLIKSIAQAIPVFAMSVFRIPKKICDCIS 637