BLASTX nr result
ID: Coptis25_contig00041090
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041090 (249 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003557017.1| PREDICTED: uncharacterized protein LOC100801... 56 5e-12 gb|ABR16307.1| unknown [Picea sitchensis] 54 6e-12 emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera] 52 8e-12 emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] 50 3e-11 emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] 50 3e-11 >ref|XP_003557017.1| PREDICTED: uncharacterized protein LOC100801364 [Glycine max] Length = 890 Score = 55.8 bits (133), Expect(2) = 5e-12 Identities = 22/37 (59%), Positives = 31/37 (83%), Gaps = 1/37 (2%) Frame = -2 Query: 128 CVYGKFHRFPFAST-SWRARTLLHLVHADICGPMRTP 21 C+ GK HRFPF+++ +WRA+ LL L+H ++CGPMRTP Sbjct: 212 CLLGKQHRFPFSTSGAWRAKDLLELIHTNVCGPMRTP 248 Score = 39.7 bits (91), Expect(2) = 5e-12 Identities = 19/43 (44%), Positives = 24/43 (55%) Frame = -1 Query: 249 SVLWH*RYGHLNYRALQLFKRKNMVIGLPPIAHEENVCEGVCL 121 S LW+ R+ H N AL+L K+M+ LP I VCEG L Sbjct: 172 SWLWNQRFDHFNTHALKLLHEKSMMRDLPSIKENNEVCEGCLL 214 >gb|ABR16307.1| unknown [Picea sitchensis] Length = 407 Score = 53.9 bits (128), Expect(2) = 6e-12 Identities = 24/40 (60%), Positives = 28/40 (70%) Frame = -1 Query: 249 SVLWH*RYGHLNYRALQLFKRKNMVIGLPPIAHEENVCEG 130 S LWH R GHLNY++L L KR MV GLP I+ + VCEG Sbjct: 72 SRLWHERMGHLNYKSLSLMKRFEMVYGLPKISQSQGVCEG 111 Score = 41.2 bits (95), Expect(2) = 6e-12 Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Frame = -2 Query: 128 CVYGKFHRFPFAS-TSWRARTLLHLVHADICGPMRTP 21 C+ GK H F SWRA+T LHLVH+D+ GP+ P Sbjct: 112 CMSGKQHMEKFIKGKSWRAKTPLHLVHSDLMGPLEHP 148 >emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera] Length = 1283 Score = 51.6 bits (122), Expect(2) = 8e-12 Identities = 21/37 (56%), Positives = 26/37 (70%) Frame = -1 Query: 243 LWH*RYGHLNYRALQLFKRKNMVIGLPPIAHEENVCE 133 LWH RYGHLN+ L+ ++KNMV GLPPI +CE Sbjct: 425 LWHFRYGHLNFGGLKTLQQKNMVTGLPPIXTPSQICE 461 Score = 43.1 bits (100), Expect(2) = 8e-12 Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 1/34 (2%) Frame = -2 Query: 128 CVYGKFHRFPFAS-TSWRARTLLHLVHADICGPM 30 CV GK HR+ F SWR +L LVH+DICGP+ Sbjct: 463 CVVGKQHRYQFPKGKSWRXNKVLELVHSDICGPI 496 >emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] Length = 1472 Score = 50.1 bits (118), Expect(2) = 3e-11 Identities = 25/44 (56%), Positives = 30/44 (68%) Frame = -1 Query: 249 SVLWH*RYGHLNYRALQLFKRKNMVIGLPPIAHEENVCEGVCLW 118 S LWH RYGHLN + L+L +K MV GLP I NVCEG C++ Sbjct: 422 SNLWHLRYGHLNVKGLKLLSKKEMVFGLPKI-DSVNVCEG-CIY 463 Score = 42.7 bits (99), Expect(2) = 3e-11 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%) Frame = -2 Query: 128 CVYGKFHRFPFAS-TSWRARTLLHLVHADICGPMRTPCF 15 C+YGK + PF S RA + L ++HAD+CGPM+T F Sbjct: 461 CIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASF 499 >emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] Length = 1274 Score = 50.1 bits (118), Expect(2) = 3e-11 Identities = 25/44 (56%), Positives = 30/44 (68%) Frame = -1 Query: 249 SVLWH*RYGHLNYRALQLFKRKNMVIGLPPIAHEENVCEGVCLW 118 S LWH RYGHLN + L+L +K MV GLP I NVCEG C++ Sbjct: 437 SNLWHLRYGHLNVKGLKLLSKKEMVFGLPKI-DSVNVCEG-CIY 478 Score = 42.7 bits (99), Expect(2) = 3e-11 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%) Frame = -2 Query: 128 CVYGKFHRFPFAS-TSWRARTLLHLVHADICGPMRTPCF 15 C+YGK + PF S RA + L ++HAD+CGPM+T F Sbjct: 476 CIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASF 514