BLASTX nr result

ID: Coptis25_contig00041090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041090
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557017.1| PREDICTED: uncharacterized protein LOC100801...    56   5e-12
gb|ABR16307.1| unknown [Picea sitchensis]                              54   6e-12
emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]    52   8e-12
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]    50   3e-11
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]    50   3e-11

>ref|XP_003557017.1| PREDICTED: uncharacterized protein LOC100801364 [Glycine max]
          Length = 890

 Score = 55.8 bits (133), Expect(2) = 5e-12
 Identities = 22/37 (59%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
 Frame = -2

Query: 128 CVYGKFHRFPFAST-SWRARTLLHLVHADICGPMRTP 21
           C+ GK HRFPF+++ +WRA+ LL L+H ++CGPMRTP
Sbjct: 212 CLLGKQHRFPFSTSGAWRAKDLLELIHTNVCGPMRTP 248



 Score = 39.7 bits (91), Expect(2) = 5e-12
 Identities = 19/43 (44%), Positives = 24/43 (55%)
 Frame = -1

Query: 249 SVLWH*RYGHLNYRALQLFKRKNMVIGLPPIAHEENVCEGVCL 121
           S LW+ R+ H N  AL+L   K+M+  LP I     VCEG  L
Sbjct: 172 SWLWNQRFDHFNTHALKLLHEKSMMRDLPSIKENNEVCEGCLL 214


>gb|ABR16307.1| unknown [Picea sitchensis]
          Length = 407

 Score = 53.9 bits (128), Expect(2) = 6e-12
 Identities = 24/40 (60%), Positives = 28/40 (70%)
 Frame = -1

Query: 249 SVLWH*RYGHLNYRALQLFKRKNMVIGLPPIAHEENVCEG 130
           S LWH R GHLNY++L L KR  MV GLP I+  + VCEG
Sbjct: 72  SRLWHERMGHLNYKSLSLMKRFEMVYGLPKISQSQGVCEG 111



 Score = 41.2 bits (95), Expect(2) = 6e-12
 Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -2

Query: 128 CVYGKFHRFPFAS-TSWRARTLLHLVHADICGPMRTP 21
           C+ GK H   F    SWRA+T LHLVH+D+ GP+  P
Sbjct: 112 CMSGKQHMEKFIKGKSWRAKTPLHLVHSDLMGPLEHP 148


>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
          Length = 1283

 Score = 51.6 bits (122), Expect(2) = 8e-12
 Identities = 21/37 (56%), Positives = 26/37 (70%)
 Frame = -1

Query: 243 LWH*RYGHLNYRALQLFKRKNMVIGLPPIAHEENVCE 133
           LWH RYGHLN+  L+  ++KNMV GLPPI     +CE
Sbjct: 425 LWHFRYGHLNFGGLKTLQQKNMVTGLPPIXTPSQICE 461



 Score = 43.1 bits (100), Expect(2) = 8e-12
 Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = -2

Query: 128 CVYGKFHRFPFAS-TSWRARTLLHLVHADICGPM 30
           CV GK HR+ F    SWR   +L LVH+DICGP+
Sbjct: 463 CVVGKQHRYQFPKGKSWRXNKVLELVHSDICGPI 496


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score = 50.1 bits (118), Expect(2) = 3e-11
 Identities = 25/44 (56%), Positives = 30/44 (68%)
 Frame = -1

Query: 249 SVLWH*RYGHLNYRALQLFKRKNMVIGLPPIAHEENVCEGVCLW 118
           S LWH RYGHLN + L+L  +K MV GLP I    NVCEG C++
Sbjct: 422 SNLWHLRYGHLNVKGLKLLSKKEMVFGLPKI-DSVNVCEG-CIY 463



 Score = 42.7 bits (99), Expect(2) = 3e-11
 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = -2

Query: 128 CVYGKFHRFPFAS-TSWRARTLLHLVHADICGPMRTPCF 15
           C+YGK  + PF    S RA + L ++HAD+CGPM+T  F
Sbjct: 461 CIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASF 499


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score = 50.1 bits (118), Expect(2) = 3e-11
 Identities = 25/44 (56%), Positives = 30/44 (68%)
 Frame = -1

Query: 249 SVLWH*RYGHLNYRALQLFKRKNMVIGLPPIAHEENVCEGVCLW 118
           S LWH RYGHLN + L+L  +K MV GLP I    NVCEG C++
Sbjct: 437 SNLWHLRYGHLNVKGLKLLSKKEMVFGLPKI-DSVNVCEG-CIY 478



 Score = 42.7 bits (99), Expect(2) = 3e-11
 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = -2

Query: 128 CVYGKFHRFPFAS-TSWRARTLLHLVHADICGPMRTPCF 15
           C+YGK  + PF    S RA + L ++HAD+CGPM+T  F
Sbjct: 476 CIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASF 514


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