BLASTX nr result
ID: Coptis25_contig00041086
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041086 (693 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera] 122 9e-26 emb|CBI32833.3| unnamed protein product [Vitis vinifera] 119 4e-25 ref|XP_003530248.1| PREDICTED: Werner syndrome ATP-dependent hel... 119 6e-25 dbj|BAC16150.1| hypothetical protein [Oryza sativa Japonica Grou... 118 1e-24 dbj|BAK05990.1| predicted protein [Hordeum vulgare subsp. vulgare] 118 1e-24 >emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera] Length = 208 Score = 122 bits (305), Expect = 9e-26 Identities = 74/167 (44%), Positives = 102/167 (61%), Gaps = 10/167 (5%) Frame = -1 Query: 690 NMNRYKTDKSIVVGLGVQWRPPSS---NKVATLQLCVGSRCLIFQICRSNSIPWSLREFL 520 +++R++ K ++VGL ++WRP ++ N VA LQLCVG RCLIFQ+ + IP SL +FL Sbjct: 44 HIHRHRLHK-LIVGLDIEWRPNNARYTNPVAILQLCVGRRCLIFQLLYAPEIPTSLIDFL 102 Query: 519 SNGVATFVGVRNYNDADMLFRDYKLRVKNVLELGKLAGN-------RGASMEYLASSVLG 361 + TFVGV D+ L D+ LRV NV++L LA R A ++ LA VLG Sbjct: 103 GDTDYTFVGVGIQADSQKLLNDHNLRVGNVVDLAVLAARVLNTRELRNAGIKRLAREVLG 162 Query: 360 FDGVMKLEEVGRSDWGHKELTQEQVEYACVDAYVSFQIGKKLQAWKY 220 + V K + V RS W L+ QV YACVDA+VSF++G+ L A Y Sbjct: 163 RE-VEKPKHVARSRWDTDWLSDAQVHYACVDAFVSFEVGRSLNASAY 208 >emb|CBI32833.3| unnamed protein product [Vitis vinifera] Length = 208 Score = 119 bits (299), Expect = 4e-25 Identities = 73/164 (44%), Positives = 101/164 (61%), Gaps = 10/164 (6%) Frame = -1 Query: 690 NMNRYKTDKSIVVGLGVQWRPPSS---NKVATLQLCVGSRCLIFQICRSNSIPWSLREFL 520 +++R++ K ++VGL ++WRP ++ N VA LQLCVG RCLIFQ+ + IP SL +FL Sbjct: 44 HIHRHRLHK-LIVGLDIEWRPNNARYTNPVAILQLCVGRRCLIFQLLYAPEIPTSLIDFL 102 Query: 519 SNGVATFVGVRNYNDADMLFRDYKLRVKNVLELGKLAGN-------RGASMEYLASSVLG 361 + TFVGV D+ L D+ LRV NV++L LA R A ++ LA VLG Sbjct: 103 GDTDYTFVGVGIQADSQKLLNDHNLRVGNVVDLAVLAARVLNTRELRNAGIKRLAREVLG 162 Query: 360 FDGVMKLEEVGRSDWGHKELTQEQVEYACVDAYVSFQIGKKLQA 229 + V K + V RS W L+ QV YACVDA+VSF++G+ L A Sbjct: 163 RE-VEKPKHVARSRWDTDWLSDAQVHYACVDAFVSFEVGRCLNA 205 >ref|XP_003530248.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Glycine max] Length = 212 Score = 119 bits (298), Expect = 6e-25 Identities = 74/162 (45%), Positives = 93/162 (57%), Gaps = 13/162 (8%) Frame = -1 Query: 681 RYKTDKSIVVGLGVQWRPPSS------NKVATLQLCVGSRCLIFQICRSNSIPWSLREFL 520 R D ++VGL V+W+P + N VATLQLC+G CLIFQI + IP +L FL Sbjct: 50 RNNADDLMIVGLDVEWKPNTRPNMQPPNPVATLQLCIGHNCLIFQILYAPLIPRALSSFL 109 Query: 519 SNGVATFVGVRNYNDADMLFRDYKLRVKNVLELGKLAGN-------RGASMEYLASSVLG 361 +N FVGV DAD L RDY LRV NV EL LA + A + L VLG Sbjct: 110 NNPDVIFVGVGIQEDADKLLRDYNLRVTNVGELRSLAAEELQVFQLQWAGLAALGHYVLG 169 Query: 360 FDGVMKLEEVGRSDWGHKELTQEQVEYACVDAYVSFQIGKKL 235 F+ + K E V S W ++ LT EQV YA +DA+VS +IG+ L Sbjct: 170 FE-IDKPENVTMSRWDNRYLTDEQVAYAAIDAFVSGEIGRAL 210 >dbj|BAC16150.1| hypothetical protein [Oryza sativa Japonica Group] gi|24414042|dbj|BAC22291.1| hypothetical protein [Oryza sativa Japonica Group] Length = 752 Score = 118 bits (296), Expect = 1e-24 Identities = 65/158 (41%), Positives = 94/158 (59%), Gaps = 8/158 (5%) Frame = -1 Query: 693 RNMNRYKTDKSIVVGLGVQWRPPS-------SNKVATLQLCVGSRCLIFQICRSNSIPWS 535 R+ R ++ + V +GVQW PPS + TLQLCVGSRCL+FQ+ + N+ P + Sbjct: 579 RHGRRLRSGAGLTVAMGVQWTPPSRALAGGAEPRPGTLQLCVGSRCLVFQVAQGNAFPAA 638 Query: 534 LREFLSNG-VATFVGVRNYNDADMLFRDYKLRVKNVLELGKLAGNRGASMEYLASSVLGF 358 LR FL++G VA FVG +D L + L V EL + G +SM +A +LG Sbjct: 639 LRRFLADGGVAAFVGYGIRSDCRKLAAHHGLHVACTRELRAVTGMGSSSMARMAEELLGL 698 Query: 357 DGVMKLEEVGRSDWGHKELTQEQVEYACVDAYVSFQIG 244 G+ K VGRS W +L+++QV+YACVDA++S ++G Sbjct: 699 AGIKKPAAVGRSRWDAPKLSKKQVKYACVDAFLSHRLG 736 Score = 114 bits (286), Expect = 1e-23 Identities = 66/150 (44%), Positives = 86/150 (57%), Gaps = 8/150 (5%) Frame = -1 Query: 660 IVVGLGVQWRP--------PSSNKVATLQLCVGSRCLIFQICRSNSIPWSLREFLSNGVA 505 ++VGLGVQW P ATLQLCVG RCL+F + +++IP +LR FL++ Sbjct: 62 LLVGLGVQWTPLRRPLHRGSPPPPPATLQLCVGHRCLVFHLAHADAIPAALRRFLADPRI 121 Query: 504 TFVGVRNYNDADMLFRDYKLRVKNVLELGKLAGNRGASMEYLASSVLGFDGVMKLEEVGR 325 TFVG ND ML Y L V + EL +A ASME +A LG+ G+ K V Sbjct: 122 TFVGSGASNDRRMLSAYYDLHVASARELRAVAAMGNASMEAMADRFLGYPGIAKPTNVSM 181 Query: 324 SDWGHKELTQEQVEYACVDAYVSFQIGKKL 235 S W L+ EQVEYACVDAY++F++ L Sbjct: 182 SAWHAPYLSIEQVEYACVDAYLAFRLAVHL 211 >dbj|BAK05990.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 212 Score = 118 bits (296), Expect = 1e-24 Identities = 68/157 (43%), Positives = 96/157 (61%), Gaps = 10/157 (6%) Frame = -1 Query: 660 IVVGLGVQWRPP---SSNKVATLQLCVGSRCLIFQICRSNSIPWSLREFLSNGVATFVGV 490 ++VGL V+WRP + N VA LQLCVG RCLIFQ+ ++ IP +LR FL++ FVGV Sbjct: 46 LIVGLDVEWRPSFGRAQNPVALLQLCVGRRCLIFQLLHADFIPLALRRFLADPDFRFVGV 105 Query: 489 RNYNDADMLFRDYKLRVKNVLELGKLAGN-------RGASMEYLASSVLGFDGVMKLEEV 331 ND D L D+ L V NV++L LA + R A ++ +A V+G + + K V Sbjct: 106 GVQNDVDRLNDDHGLEVANVVDLRSLAADEMRRPWLRQAGLKDVAGVVMGAN-LHKPRRV 164 Query: 330 GRSDWGHKELTQEQVEYACVDAYVSFQIGKKLQAWKY 220 W L+QEQ++YAC+DA+VSF++G+KL Y Sbjct: 165 TMGPWDACRLSQEQIQYACIDAFVSFEVGRKLLTGDY 201