BLASTX nr result

ID: Coptis25_contig00041086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041086
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera]   122   9e-26
emb|CBI32833.3| unnamed protein product [Vitis vinifera]              119   4e-25
ref|XP_003530248.1| PREDICTED: Werner syndrome ATP-dependent hel...   119   6e-25
dbj|BAC16150.1| hypothetical protein [Oryza sativa Japonica Grou...   118   1e-24
dbj|BAK05990.1| predicted protein [Hordeum vulgare subsp. vulgare]    118   1e-24

>emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera]
          Length = 208

 Score =  122 bits (305), Expect = 9e-26
 Identities = 74/167 (44%), Positives = 102/167 (61%), Gaps = 10/167 (5%)
 Frame = -1

Query: 690 NMNRYKTDKSIVVGLGVQWRPPSS---NKVATLQLCVGSRCLIFQICRSNSIPWSLREFL 520
           +++R++  K ++VGL ++WRP ++   N VA LQLCVG RCLIFQ+  +  IP SL +FL
Sbjct: 44  HIHRHRLHK-LIVGLDIEWRPNNARYTNPVAILQLCVGRRCLIFQLLYAPEIPTSLIDFL 102

Query: 519 SNGVATFVGVRNYNDADMLFRDYKLRVKNVLELGKLAGN-------RGASMEYLASSVLG 361
            +   TFVGV    D+  L  D+ LRV NV++L  LA         R A ++ LA  VLG
Sbjct: 103 GDTDYTFVGVGIQADSQKLLNDHNLRVGNVVDLAVLAARVLNTRELRNAGIKRLAREVLG 162

Query: 360 FDGVMKLEEVGRSDWGHKELTQEQVEYACVDAYVSFQIGKKLQAWKY 220
            + V K + V RS W    L+  QV YACVDA+VSF++G+ L A  Y
Sbjct: 163 RE-VEKPKHVARSRWDTDWLSDAQVHYACVDAFVSFEVGRSLNASAY 208


>emb|CBI32833.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score =  119 bits (299), Expect = 4e-25
 Identities = 73/164 (44%), Positives = 101/164 (61%), Gaps = 10/164 (6%)
 Frame = -1

Query: 690 NMNRYKTDKSIVVGLGVQWRPPSS---NKVATLQLCVGSRCLIFQICRSNSIPWSLREFL 520
           +++R++  K ++VGL ++WRP ++   N VA LQLCVG RCLIFQ+  +  IP SL +FL
Sbjct: 44  HIHRHRLHK-LIVGLDIEWRPNNARYTNPVAILQLCVGRRCLIFQLLYAPEIPTSLIDFL 102

Query: 519 SNGVATFVGVRNYNDADMLFRDYKLRVKNVLELGKLAGN-------RGASMEYLASSVLG 361
            +   TFVGV    D+  L  D+ LRV NV++L  LA         R A ++ LA  VLG
Sbjct: 103 GDTDYTFVGVGIQADSQKLLNDHNLRVGNVVDLAVLAARVLNTRELRNAGIKRLAREVLG 162

Query: 360 FDGVMKLEEVGRSDWGHKELTQEQVEYACVDAYVSFQIGKKLQA 229
            + V K + V RS W    L+  QV YACVDA+VSF++G+ L A
Sbjct: 163 RE-VEKPKHVARSRWDTDWLSDAQVHYACVDAFVSFEVGRCLNA 205


>ref|XP_003530248.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Glycine
           max]
          Length = 212

 Score =  119 bits (298), Expect = 6e-25
 Identities = 74/162 (45%), Positives = 93/162 (57%), Gaps = 13/162 (8%)
 Frame = -1

Query: 681 RYKTDKSIVVGLGVQWRPPSS------NKVATLQLCVGSRCLIFQICRSNSIPWSLREFL 520
           R   D  ++VGL V+W+P +       N VATLQLC+G  CLIFQI  +  IP +L  FL
Sbjct: 50  RNNADDLMIVGLDVEWKPNTRPNMQPPNPVATLQLCIGHNCLIFQILYAPLIPRALSSFL 109

Query: 519 SNGVATFVGVRNYNDADMLFRDYKLRVKNVLELGKLAGN-------RGASMEYLASSVLG 361
           +N    FVGV    DAD L RDY LRV NV EL  LA         + A +  L   VLG
Sbjct: 110 NNPDVIFVGVGIQEDADKLLRDYNLRVTNVGELRSLAAEELQVFQLQWAGLAALGHYVLG 169

Query: 360 FDGVMKLEEVGRSDWGHKELTQEQVEYACVDAYVSFQIGKKL 235
           F+ + K E V  S W ++ LT EQV YA +DA+VS +IG+ L
Sbjct: 170 FE-IDKPENVTMSRWDNRYLTDEQVAYAAIDAFVSGEIGRAL 210


>dbj|BAC16150.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|24414042|dbj|BAC22291.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 752

 Score =  118 bits (296), Expect = 1e-24
 Identities = 65/158 (41%), Positives = 94/158 (59%), Gaps = 8/158 (5%)
 Frame = -1

Query: 693  RNMNRYKTDKSIVVGLGVQWRPPS-------SNKVATLQLCVGSRCLIFQICRSNSIPWS 535
            R+  R ++   + V +GVQW PPS         +  TLQLCVGSRCL+FQ+ + N+ P +
Sbjct: 579  RHGRRLRSGAGLTVAMGVQWTPPSRALAGGAEPRPGTLQLCVGSRCLVFQVAQGNAFPAA 638

Query: 534  LREFLSNG-VATFVGVRNYNDADMLFRDYKLRVKNVLELGKLAGNRGASMEYLASSVLGF 358
            LR FL++G VA FVG    +D   L   + L V    EL  + G   +SM  +A  +LG 
Sbjct: 639  LRRFLADGGVAAFVGYGIRSDCRKLAAHHGLHVACTRELRAVTGMGSSSMARMAEELLGL 698

Query: 357  DGVMKLEEVGRSDWGHKELTQEQVEYACVDAYVSFQIG 244
             G+ K   VGRS W   +L+++QV+YACVDA++S ++G
Sbjct: 699  AGIKKPAAVGRSRWDAPKLSKKQVKYACVDAFLSHRLG 736



 Score =  114 bits (286), Expect = 1e-23
 Identities = 66/150 (44%), Positives = 86/150 (57%), Gaps = 8/150 (5%)
 Frame = -1

Query: 660 IVVGLGVQWRP--------PSSNKVATLQLCVGSRCLIFQICRSNSIPWSLREFLSNGVA 505
           ++VGLGVQW P              ATLQLCVG RCL+F +  +++IP +LR FL++   
Sbjct: 62  LLVGLGVQWTPLRRPLHRGSPPPPPATLQLCVGHRCLVFHLAHADAIPAALRRFLADPRI 121

Query: 504 TFVGVRNYNDADMLFRDYKLRVKNVLELGKLAGNRGASMEYLASSVLGFDGVMKLEEVGR 325
           TFVG    ND  ML   Y L V +  EL  +A    ASME +A   LG+ G+ K   V  
Sbjct: 122 TFVGSGASNDRRMLSAYYDLHVASARELRAVAAMGNASMEAMADRFLGYPGIAKPTNVSM 181

Query: 324 SDWGHKELTQEQVEYACVDAYVSFQIGKKL 235
           S W    L+ EQVEYACVDAY++F++   L
Sbjct: 182 SAWHAPYLSIEQVEYACVDAYLAFRLAVHL 211


>dbj|BAK05990.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 212

 Score =  118 bits (296), Expect = 1e-24
 Identities = 68/157 (43%), Positives = 96/157 (61%), Gaps = 10/157 (6%)
 Frame = -1

Query: 660 IVVGLGVQWRPP---SSNKVATLQLCVGSRCLIFQICRSNSIPWSLREFLSNGVATFVGV 490
           ++VGL V+WRP    + N VA LQLCVG RCLIFQ+  ++ IP +LR FL++    FVGV
Sbjct: 46  LIVGLDVEWRPSFGRAQNPVALLQLCVGRRCLIFQLLHADFIPLALRRFLADPDFRFVGV 105

Query: 489 RNYNDADMLFRDYKLRVKNVLELGKLAGN-------RGASMEYLASSVLGFDGVMKLEEV 331
              ND D L  D+ L V NV++L  LA +       R A ++ +A  V+G + + K   V
Sbjct: 106 GVQNDVDRLNDDHGLEVANVVDLRSLAADEMRRPWLRQAGLKDVAGVVMGAN-LHKPRRV 164

Query: 330 GRSDWGHKELTQEQVEYACVDAYVSFQIGKKLQAWKY 220
               W    L+QEQ++YAC+DA+VSF++G+KL    Y
Sbjct: 165 TMGPWDACRLSQEQIQYACIDAFVSFEVGRKLLTGDY 201


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