BLASTX nr result

ID: Coptis25_contig00041081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041081
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
gb|ABE65398.1| hypothetical protein At1g43570 [Arabidopsis thali...    55   8e-06

>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/86 (39%), Positives = 50/86 (58%)
 Frame = -3

Query: 273 LVRRRGFWQLKVPSDCSSSWRNILKVRKEASSIVLHQIGNGRETSFWDEPWHPFGILREM 94
           L+R R FW +K P +CSS+W  ILK+R  A   + + IG+G  TS W + WHP   L + 
Sbjct: 731 LLRGRNFWTIKTPQNCSSAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADS 790

Query: 93  FPQGLLYNSSCNKQAKVANCISDGKW 16
           + +  +Y+S   K AKV   I + +W
Sbjct: 791 YGERFIYDSGMAKNAKVNVLIQNSEW 816


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/90 (36%), Positives = 51/90 (56%)
 Frame = -3

Query: 285 VQKYLVRRRGFWQLKVPSDCSSSWRNILKVRKEASSIVLHQIGNGRETSFWDEPWHPFGI 106
           ++  L+R R FW +K P +CS +W  ILK+R  A   + + IG+G  TS W + WHP   
Sbjct: 194 IRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSP 253

Query: 105 LREMFPQGLLYNSSCNKQAKVANCISDGKW 16
           L + + +  +Y+S   K AKV   I + +W
Sbjct: 254 LADSYGERFIYDSGMAKNAKVNVLIQNSEW 283


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/86 (38%), Positives = 49/86 (56%)
 Frame = -3

Query: 273  LVRRRGFWQLKVPSDCSSSWRNILKVRKEASSIVLHQIGNGRETSFWDEPWHPFGILREM 94
            L+R R FW +K P +CS +W  ILK+R  A   + + IG+G  TS W + WHP   L + 
Sbjct: 1071 LLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADS 1130

Query: 93   FPQGLLYNSSCNKQAKVANCISDGKW 16
            + +  +Y+S   K AKV   I + +W
Sbjct: 1131 YGERFIYDSGMAKNAKVNVLIQNSEW 1156


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/86 (37%), Positives = 48/86 (55%)
 Frame = -3

Query: 273 LVRRRGFWQLKVPSDCSSSWRNILKVRKEASSIVLHQIGNGRETSFWDEPWHPFGILREM 94
           +V  R FW +K P +CS +W  ILK+R  A   + + IG+G  TS W + WHP   L + 
Sbjct: 16  IVISRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADS 75

Query: 93  FPQGLLYNSSCNKQAKVANCISDGKW 16
           + +  +Y+S   K AKV   I + +W
Sbjct: 76  YGERFIYDSGMAKNAKVNVLIQNSEW 101


>gb|ABE65398.1| hypothetical protein At1g43570 [Arabidopsis thaliana]
          Length = 348

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = -3

Query: 285 VQKYLVRRRGFWQLKVPSDCSS-SWRNILKVRKEASSIVLHQIGNGRETSFWDEPWHPFG 109
           VQ YL+RR  FW +K  S   S  WR +L +R  A S    +I NGR TSFW + W   G
Sbjct: 130 VQTYLIRRNNFWAIKASSYQGSWMWRKLLTLRDVARSFHKKEIHNGRNTSFWYDHWSSMG 189

Query: 108 IL 103
            L
Sbjct: 190 TL 191


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