BLASTX nr result

ID: Coptis25_contig00041039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041039
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277011.2| PREDICTED: probable carboxylesterase 8-like ...    59   3e-07
emb|CBI38813.3| unnamed protein product [Vitis vinifera]               59   3e-07
emb|CAN60859.1| hypothetical protein VITISV_032629 [Vitis vinifera]    59   3e-07
ref|XP_002511752.1| Gibberellin receptor GID1, putative [Ricinus...    56   4e-06
ref|XP_002320078.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_002277011.2| PREDICTED: probable carboxylesterase 8-like [Vitis vinifera]
          Length = 336

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/59 (45%), Positives = 41/59 (69%)
 Frame = +3

Query: 3   LVDRQKEFSNMLGDQGACVVENYSDDGYHACELFIPDKAQALVMNVKDFIYSPGTMSTL 179
           LVDRQ+ F+ M+  +G  VV  ++D G+H  E+F P +A+AL  +VK+FIYS  + ST+
Sbjct: 278 LVDRQRRFAEMMEARGVHVVAKFNDGGHHGVEIFDPSQAEALYNDVKNFIYSTASKSTM 336


>emb|CBI38813.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/59 (45%), Positives = 41/59 (69%)
 Frame = +3

Query: 3   LVDRQKEFSNMLGDQGACVVENYSDDGYHACELFIPDKAQALVMNVKDFIYSPGTMSTL 179
           LVDRQ+ F+ M+  +G  VV  ++D G+H  E+F P +A+AL  +VK+FIYS  + ST+
Sbjct: 189 LVDRQRRFAEMMEARGVHVVAKFNDGGHHGVEIFDPSQAEALYNDVKNFIYSTASKSTM 247


>emb|CAN60859.1| hypothetical protein VITISV_032629 [Vitis vinifera]
          Length = 336

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/59 (45%), Positives = 41/59 (69%)
 Frame = +3

Query: 3   LVDRQKEFSNMLGDQGACVVENYSDDGYHACELFIPDKAQALVMNVKDFIYSPGTMSTL 179
           LVDRQ+ F+ M+  +G  VV  ++D G+H  E+F P +A+AL  +VK+FIYS  + ST+
Sbjct: 278 LVDRQRRFAEMMEARGVHVVAKFNDGGHHGVEIFDPSQAEALYNDVKNFIYSTASKSTM 336


>ref|XP_002511752.1| Gibberellin receptor GID1, putative [Ricinus communis]
           gi|223548932|gb|EEF50421.1| Gibberellin receptor GID1,
           putative [Ricinus communis]
          Length = 340

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 28/50 (56%), Positives = 35/50 (70%)
 Frame = +3

Query: 3   LVDRQKEFSNMLGDQGACVVENYSDDGYHACELFIPDKAQALVMNVKDFI 152
           LVD+QKEF+  L   G  VV ++S+DG+HA ELF P KAQ L  +VK FI
Sbjct: 285 LVDKQKEFAKKLQSNGVKVVSSFSEDGFHAVELFDPLKAQPLYDDVKTFI 334


>ref|XP_002320078.1| predicted protein [Populus trichocarpa] gi|222860851|gb|EEE98393.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/61 (52%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
 Frame = +3

Query: 3   LVDRQKEFSNMLGDQGACVVENYSDDGYHACELFIPDKAQALVMNVKDFI--YSPGTMST 176
           L D+QKEFS ML   G  VV +   DGYHA ELF P KA+A    VK+FI   SP T S+
Sbjct: 265 LSDKQKEFSKMLESLGVHVVTSSDPDGYHAVELFDPRKAKAFYDEVKEFISTASPATNSS 324

Query: 177 L 179
           +
Sbjct: 325 M 325


Top