BLASTX nr result

ID: Coptis25_contig00041029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041029
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]    60   2e-07
ref|XP_002534054.1| conserved hypothetical protein [Ricinus comm...    58   7e-07
ref|XP_002518141.1| conserved hypothetical protein [Ricinus comm...    58   9e-07
ref|XP_002332079.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
gb|EEC82831.1| hypothetical protein OsI_27637 [Oryza sativa Indi...    56   4e-06

>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/79 (43%), Positives = 45/79 (56%)
 Frame = -3

Query: 320 VKLLRGCEERARNFYFEDQFSCCYSSDEFVRMMLLDGCFIVEFLLLRVKPRQVNKYDPIM 141
           VK +R  E R R  Y E      + SDEFV MMLLDGCFI+E  L     +  ++ DPI 
Sbjct: 103 VKAMRELEARTRGCYAE---IIKFDSDEFVTMMLLDGCFIIELFLKNKNKQLRDEDDPIF 159

Query: 140 KSYSLSSSVTRDILLLENQ 84
               + + + RD++LLENQ
Sbjct: 160 NRTMVLTDLHRDLILLENQ 178


>ref|XP_002534054.1| conserved hypothetical protein [Ricinus communis]
           gi|223525925|gb|EEF28332.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 419

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/79 (41%), Positives = 46/79 (58%)
 Frame = -3

Query: 320 VKLLRGCEERARNFYFEDQFSCCYSSDEFVRMMLLDGCFIVEFLLLRVKPRQVNKYDPIM 141
           +K L+G EE+AR  Y E       SS +F +MML DGCFI+E  L  ++    +  DPI+
Sbjct: 88  LKALQGLEEKARRCYGE---IIDLSSKKFKKMMLYDGCFIIELFLRFMREAPGSVDDPIL 144

Query: 140 KSYSLSSSVTRDILLLENQ 84
           K   L   + RD++L ENQ
Sbjct: 145 KRIGLLKRIKRDMILFENQ 163


>ref|XP_002518141.1| conserved hypothetical protein [Ricinus communis]
           gi|223542737|gb|EEF44274.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 422

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/79 (43%), Positives = 47/79 (59%)
 Frame = -3

Query: 320 VKLLRGCEERARNFYFEDQFSCCYSSDEFVRMMLLDGCFIVEFLLLRVKPRQVNKYDPIM 141
           V+ +R  EE ARN Y E       + DEFV MM++DGCFIVEF    V+    +  DPI 
Sbjct: 88  VQAIRALEETARNCYSEP---VSLTQDEFVEMMVVDGCFIVEFSYRCVE--TADPEDPIF 142

Query: 140 KSYSLSSSVTRDILLLENQ 84
           ++  + S +  D+LL+ENQ
Sbjct: 143 QTNQIQSRLMLDLLLVENQ 161


>ref|XP_002332079.1| predicted protein [Populus trichocarpa] gi|222831965|gb|EEE70442.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
 Frame = -3

Query: 320 VKLLRGCEERARNFYFEDQFSCCYSSDEFVRMMLLDGCFIVEFL--LLRVKPRQVNKYDP 147
           V  +RG E +AR +Y  DQ +     D FV M+LLDGCFIVE +  L     +Q ++ DP
Sbjct: 86  VAAMRGLEAQARRYY--DQ-TVSLGEDAFVEMLLLDGCFIVELICKLATSGLQQGDQNDP 142

Query: 146 IMKSYSLSSSVTRDILLLENQ 84
           ++ +  + S ++ DILLLENQ
Sbjct: 143 VIGNLLILSRISYDILLLENQ 163


>gb|EEC82831.1| hypothetical protein OsI_27637 [Oryza sativa Indica Group]
          Length = 415

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
 Frame = -3

Query: 311 LRGCEERARNFYFEDQFSCCYSSDEFVRMMLLDGCFIVEFLLLRVKPRQVNKYDPIMKSY 132
           LRGC       Y +D+   C+S DEF  MML+DGCF+++F++         K  P+ +  
Sbjct: 99  LRGC-------YADDEKLECFSDDEFAAMMLVDGCFLLQFMM--------EKRKPLFEGR 143

Query: 131 SLSS--SVTRDILLLENQ 84
           +LSS  S+ +D++LLENQ
Sbjct: 144 ALSSEYSILKDMMLLENQ 161


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