BLASTX nr result
ID: Coptis25_contig00041028
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041028 (241 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 58 7e-07 emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] 58 9e-07 ref|NP_200326.2| uncharacterized protein [Arabidopsis thaliana] ... 55 6e-06 dbj|BAB08584.1| unnamed protein product [Arabidopsis thaliana] 55 6e-06 emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera] 55 6e-06 >ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera] Length = 389 Score = 58.2 bits (139), Expect = 7e-07 Identities = 31/76 (40%), Positives = 43/76 (56%) Frame = -2 Query: 240 DCWTSLDSECTLIDDIVYCRDQFYAVDHYGAVWACDVRGSHPRVSRVASPIDDMSFWTKN 61 D WT L+ + +D+++ R FYAV+ YG++ CDV GS PRVS + P Sbjct: 197 DSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMP--QQFGGDLQ 254 Query: 60 YIVESSGDLLQVKRIL 13 Y+VES +LL V R L Sbjct: 255 YLVESGEELLLVTRYL 270 >emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] Length = 389 Score = 57.8 bits (138), Expect = 9e-07 Identities = 31/76 (40%), Positives = 43/76 (56%) Frame = -2 Query: 240 DCWTSLDSECTLIDDIVYCRDQFYAVDHYGAVWACDVRGSHPRVSRVASPIDDMSFWTKN 61 D WT L+ + +D+++ R FYAV+ YG++ CDV GS PRVS + P Sbjct: 197 DSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMP--QQFGGDLQ 254 Query: 60 YIVESSGDLLQVKRIL 13 Y+VES +LL V R L Sbjct: 255 YLVESGEELLLVTRYL 270 >ref|NP_200326.2| uncharacterized protein [Arabidopsis thaliana] gi|142991284|sp|Q9FLP7.2|FB294_ARATH RecName: Full=Putative F-box protein At5g55150 gi|332009209|gb|AED96592.1| uncharacterized protein [Arabidopsis thaliana] Length = 360 Score = 55.1 bits (131), Expect = 6e-06 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Frame = -2 Query: 234 WTSLDSECTLIDDIVYCRDQFYAVDHYGAVWACDVRGSHPRVSRVASPIDDMSFWTKNYI 55 WT L+S + +DDIV+C F+A+D G ++ C++ ++P+ + + S K Y+ Sbjct: 176 WTDLESVASSVDDIVFCNGVFFAIDRLGEIYHCELSANNPKATPLCSTSPFRYDSCKKYL 235 Query: 54 VESSGDLLQV--KRILLEDD 1 ES D L V K++ L DD Sbjct: 236 AESDYDELWVVLKKLELNDD 255 >dbj|BAB08584.1| unnamed protein product [Arabidopsis thaliana] Length = 340 Score = 55.1 bits (131), Expect = 6e-06 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Frame = -2 Query: 234 WTSLDSECTLIDDIVYCRDQFYAVDHYGAVWACDVRGSHPRVSRVASPIDDMSFWTKNYI 55 WT L+S + +DDIV+C F+A+D G ++ C++ ++P+ + + S K Y+ Sbjct: 156 WTDLESVASSVDDIVFCNGVFFAIDRLGEIYHCELSANNPKATPLCSTSPFRYDSCKKYL 215 Query: 54 VESSGDLLQV--KRILLEDD 1 ES D L V K++ L DD Sbjct: 216 AESDYDELWVVLKKLELNDD 235 >emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera] Length = 1290 Score = 55.1 bits (131), Expect = 6e-06 Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 5/81 (6%) Frame = -2 Query: 234 WTSLDSECTLIDDIVYCRDQFYAVDHYGAVWACDVRGSHPRVSRVAS-----PIDDMSFW 70 WT L+SE +DDI+Y F AV+ VW CD+ GS + R A+ +D++ + Sbjct: 1099 WTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISGSQLKTIRFAAAPALQDVDEIEYE 1158 Query: 69 TKNYIVESSGDLLQVKRILLE 7 K Y+VES G++ V R L + Sbjct: 1159 AK-YLVESGGEIYMVTRNLYD 1178