BLASTX nr result

ID: Coptis25_contig00041019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041019
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39702.3| unnamed protein product [Vitis vinifera]              143   2e-32
ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3...   142   4e-32
ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3...   142   4e-32
ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3...   142   4e-32
emb|CBI39701.3| unnamed protein product [Vitis vinifera]              142   4e-32

>emb|CBI39702.3| unnamed protein product [Vitis vinifera]
          Length = 798

 Score =  143 bits (360), Expect = 2e-32
 Identities = 65/114 (57%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
 Frame = +1

Query: 10  WQILIYF-PVVVICIWYQQFCMGAGRELVRLAALTNASLIQHFTESLSGSLTIRSFDQEA 186
           WQ+ I F PV+  CIWYQQ+ + + REL RLA +  A +IQHF+E++SGS+T+RSFDQE+
Sbjct: 349 WQVFIVFIPVIATCIWYQQYYISSARELSRLARVCKAPVIQHFSETISGSMTVRSFDQES 408

Query: 187 RFMDTNLKLINTYSRPEFHYSVALEWLGLRLDILASITFALCLIFLISMPSGLI 348
           RF DTN+KL++ Y RP+F+ + A+EWL  RLD+L+S+TFA  L+FLIS+P G+I
Sbjct: 409 RFKDTNMKLVDGYLRPKFNIAGAMEWLCFRLDMLSSVTFAFSLVFLISVPEGVI 462


>ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/114 (57%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
 Frame = +1

Query: 10   WQILIYF-PVVVICIWYQQFCMGAGRELVRLAALTNASLIQHFTESLSGSLTIRSFDQEA 186
            WQ+ I F PV+  CIWYQQ+ + + REL RLA +  A +IQHF+E+++GS+TIRSFDQE+
Sbjct: 1057 WQVFIVFIPVIATCIWYQQYYIPSARELSRLAGVCKAPVIQHFSETIAGSMTIRSFDQES 1116

Query: 187  RFMDTNLKLINTYSRPEFHYSVALEWLGLRLDILASITFALCLIFLISMPSGLI 348
            RF DTN+KL++ Y RP+F+ + A+EWL  RLD+L+S+TFA  L+FLIS+P G+I
Sbjct: 1117 RFRDTNMKLVDGYLRPKFNIAGAMEWLCFRLDMLSSVTFAFSLVFLISVPEGVI 1170


>ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/114 (58%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
 Frame = +1

Query: 10   WQILIYF-PVVVICIWYQQFCMGAGRELVRLAALTNASLIQHFTESLSGSLTIRSFDQEA 186
            WQ+ I F PV   CIWYQQ+ + + REL RLA +  A +IQHF+E++SGS+TIRSFDQE+
Sbjct: 1057 WQVFIVFIPVAATCIWYQQYYIPSARELSRLAGVCKAPIIQHFSETISGSMTIRSFDQES 1116

Query: 187  RFMDTNLKLINTYSRPEFHYSVALEWLGLRLDILASITFALCLIFLISMPSGLI 348
            RF DTN+KLI+ Y RP+F  + A+EWL  RLD+L+S+TFA  L+FLIS+P G+I
Sbjct: 1117 RFRDTNMKLIDGYIRPKFSIAGAIEWLCFRLDMLSSVTFAFSLVFLISVPEGVI 1170


>ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1485

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/114 (57%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
 Frame = +1

Query: 10   WQILIYF-PVVVICIWYQQFCMGAGRELVRLAALTNASLIQHFTESLSGSLTIRSFDQEA 186
            WQ+ I F P++  CIWYQ++ + + REL RL  +  A +IQHF+E++SGS TIRSFDQE+
Sbjct: 1061 WQVFIVFVPMIATCIWYQRYYISSARELARLVGVCKAPVIQHFSETISGSTTIRSFDQES 1120

Query: 187  RFMDTNLKLINTYSRPEFHYSVALEWLGLRLDILASITFALCLIFLISMPSGLI 348
            RF DTN+KLI+ Y+RP+F+ + A+EWL  RLD+L+SITFA  L+FLIS+P G I
Sbjct: 1121 RFRDTNMKLIDGYTRPKFNSAAAMEWLCFRLDVLSSITFAFSLVFLISIPEGAI 1174


>emb|CBI39701.3| unnamed protein product [Vitis vinifera]
          Length = 1355

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/114 (57%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
 Frame = +1

Query: 10   WQILIYF-PVVVICIWYQQFCMGAGRELVRLAALTNASLIQHFTESLSGSLTIRSFDQEA 186
            WQ+ I F PV+  CIWYQQ+ + + REL RLA +  A +IQHF+E+++GS+TIRSFDQE+
Sbjct: 924  WQVFIVFIPVIATCIWYQQYYIPSARELSRLAGVCKAPVIQHFSETIAGSMTIRSFDQES 983

Query: 187  RFMDTNLKLINTYSRPEFHYSVALEWLGLRLDILASITFALCLIFLISMPSGLI 348
            RF DTN+KL++ Y RP+F+ + A+EWL  RLD+L+S+TFA  L+FLIS+P G+I
Sbjct: 984  RFRDTNMKLVDGYLRPKFNIAGAMEWLCFRLDMLSSVTFAFSLVFLISVPEGVI 1037


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