BLASTX nr result

ID: Coptis25_contig00041016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041016
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524529.1| conserved hypothetical protein [Ricinus comm...   103   2e-20
ref|NP_001030697.1| uncharacterized protein [Arabidopsis thalian...    98   6e-19
ref|NP_001030696.1| uncharacterized protein [Arabidopsis thalian...    98   6e-19
ref|NP_188105.3| uncharacterized protein [Arabidopsis thaliana] ...    98   6e-19
ref|XP_002882898.1| hypothetical protein ARALYDRAFT_478905 [Arab...    98   8e-19

>ref|XP_002524529.1| conserved hypothetical protein [Ricinus communis]
           gi|223536203|gb|EEF37856.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 466

 Score =  103 bits (256), Expect = 2e-20
 Identities = 55/103 (53%), Positives = 74/103 (71%), Gaps = 2/103 (1%)
 Frame = +2

Query: 5   LHKLKYQDRIKNHSLKSNSSFGYLPNRSFNEENE--KKMVMEAVFAKLFASISTIKAAYA 178
           + K+K Q+R+K+    +  +  +  +  F+E+ E  K +  EA+ AKLFAS+S+IKAAYA
Sbjct: 38  VQKVKSQERVKDDKFCTKDTVNWAQSFKFSEDEELQKSLATEALLAKLFASVSSIKAAYA 97

Query: 179 QLQIAQSPYDPEEIQVADELVVTELKLLSELKQSYLKKQNDSS 307
           QLQ AQSPYD + IQ AD+LVV+ELK LSELKQ Y+KKQ D S
Sbjct: 98  QLQCAQSPYDVDGIQAADQLVVSELKNLSELKQCYIKKQFDPS 140


>ref|NP_001030697.1| uncharacterized protein [Arabidopsis thaliana]
           gi|222423752|dbj|BAH19842.1| AT3G14870 [Arabidopsis
           thaliana] gi|332642060|gb|AEE75581.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 472

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/97 (56%), Positives = 67/97 (69%)
 Frame = +2

Query: 11  KLKYQDRIKNHSLKSNSSFGYLPNRSFNEENEKKMVMEAVFAKLFASISTIKAAYAQLQI 190
           K+K    +  ++   + SF  L      EE EK++ MEA+ AKLFA+IS+IK+ YAQLQ 
Sbjct: 51  KVKLDKDLAKNAANLSESFDKL-----EEEYEKRLAMEALLAKLFATISSIKSGYAQLQY 105

Query: 191 AQSPYDPEEIQVADELVVTELKLLSELKQSYLKKQND 301
           AQSPYDP  IQ AD LVV ELK LSELKQS+LKKQ D
Sbjct: 106 AQSPYDPNGIQKADNLVVAELKTLSELKQSFLKKQLD 142


>ref|NP_001030696.1| uncharacterized protein [Arabidopsis thaliana]
           gi|28393841|gb|AAO42328.1| unknown protein [Arabidopsis
           thaliana] gi|28973373|gb|AAO64011.1| unknown protein
           [Arabidopsis thaliana] gi|332642059|gb|AEE75580.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 471

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/97 (56%), Positives = 67/97 (69%)
 Frame = +2

Query: 11  KLKYQDRIKNHSLKSNSSFGYLPNRSFNEENEKKMVMEAVFAKLFASISTIKAAYAQLQI 190
           K+K    +  ++   + SF  L      EE EK++ MEA+ AKLFA+IS+IK+ YAQLQ 
Sbjct: 50  KVKLDKDLAKNAANLSESFDKL-----EEEYEKRLAMEALLAKLFATISSIKSGYAQLQY 104

Query: 191 AQSPYDPEEIQVADELVVTELKLLSELKQSYLKKQND 301
           AQSPYDP  IQ AD LVV ELK LSELKQS+LKKQ D
Sbjct: 105 AQSPYDPNGIQKADNLVVAELKTLSELKQSFLKKQLD 141


>ref|NP_188105.3| uncharacterized protein [Arabidopsis thaliana]
           gi|8777470|dbj|BAA97050.1| unnamed protein product
           [Arabidopsis thaliana] gi|222424735|dbj|BAH20321.1|
           AT3G14870 [Arabidopsis thaliana]
           gi|332642058|gb|AEE75579.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 475

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/97 (56%), Positives = 67/97 (69%)
 Frame = +2

Query: 11  KLKYQDRIKNHSLKSNSSFGYLPNRSFNEENEKKMVMEAVFAKLFASISTIKAAYAQLQI 190
           K+K    +  ++   + SF  L      EE EK++ MEA+ AKLFA+IS+IK+ YAQLQ 
Sbjct: 54  KVKLDKDLAKNAANLSESFDKL-----EEEYEKRLAMEALLAKLFATISSIKSGYAQLQY 108

Query: 191 AQSPYDPEEIQVADELVVTELKLLSELKQSYLKKQND 301
           AQSPYDP  IQ AD LVV ELK LSELKQS+LKKQ D
Sbjct: 109 AQSPYDPNGIQKADNLVVAELKTLSELKQSFLKKQLD 145


>ref|XP_002882898.1| hypothetical protein ARALYDRAFT_478905 [Arabidopsis lyrata subsp.
           lyrata] gi|297328738|gb|EFH59157.1| hypothetical protein
           ARALYDRAFT_478905 [Arabidopsis lyrata subsp. lyrata]
          Length = 471

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 55/97 (56%), Positives = 67/97 (69%)
 Frame = +2

Query: 11  KLKYQDRIKNHSLKSNSSFGYLPNRSFNEENEKKMVMEAVFAKLFASISTIKAAYAQLQI 190
           K+K    +  ++   + SF  L      EE EK++ MEA+ AKLFA+IS+IK+ YAQLQ 
Sbjct: 49  KVKLDKDLVKNAANLSESFDKL-----EEEYEKRLAMEALLAKLFATISSIKSGYAQLQY 103

Query: 191 AQSPYDPEEIQVADELVVTELKLLSELKQSYLKKQND 301
           AQSPYDP  IQ AD LVV ELK LSELKQS+LKKQ D
Sbjct: 104 AQSPYDPNGIQKADNLVVAELKTLSELKQSFLKKQLD 140


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