BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040996
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521858.1| pentatricopeptide repeat-containing protein,...   102   4e-20
ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|XP_002313097.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containi...    94   9e-18
ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    85   7e-15

>ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538896|gb|EEF40494.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/67 (70%), Positives = 59/67 (88%)
 Frame = -1

Query: 245 AVTKSLFAEGMDKELGQVIRDVLKSCKLNDAEIAKVLVEVNEKEGNMDAVFNVLTEMAKD 66
           A+ K+LF EGMD EL +VI D+L+SCKL DAE++KVLVE+N+KEGNMD VFN+LTEMAKD
Sbjct: 458 ALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKD 517

Query: 65  GLLPYSG 45
           GL+P +G
Sbjct: 518 GLIPSTG 524


>ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/70 (65%), Positives = 60/70 (85%)
 Frame = -1

Query: 236 KSLFAEGMDKELGQVIRDVLKSCKLNDAEIAKVLVEVNEKEGNMDAVFNVLTEMAKDGLL 57
           K+LF EGM++E+ +VI D L+SC+LN+AE+AKVLVE+N KEGNM+AV NVLT+MAKDGLL
Sbjct: 692 KALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLL 751

Query: 56  PYSGRNVISG 27
           P SG+   +G
Sbjct: 752 PNSGKTAYAG 761


>ref|XP_002313097.1| predicted protein [Populus trichocarpa] gi|222849505|gb|EEE87052.1|
           predicted protein [Populus trichocarpa]
          Length = 751

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 43/64 (67%), Positives = 58/64 (90%)
 Frame = -1

Query: 245 AVTKSLFAEGMDKELGQVIRDVLKSCKLNDAEIAKVLVEVNEKEGNMDAVFNVLTEMAKD 66
           A+ K+L++EGMD++L  VIRD+L+SCKL+DAE++K LV++N KEGN+DAVFN+LTEMAKD
Sbjct: 678 ALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKD 737

Query: 65  GLLP 54
           G LP
Sbjct: 738 GFLP 741


>ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/67 (67%), Positives = 58/67 (86%)
 Frame = -1

Query: 245 AVTKSLFAEGMDKELGQVIRDVLKSCKLNDAEIAKVLVEVNEKEGNMDAVFNVLTEMAKD 66
           A+ K+L  EGM+ EL ++++++L+SC+LNDA++AKVLVEVN KEGNMDAV NVLTEMAKD
Sbjct: 682 ALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKD 741

Query: 65  GLLPYSG 45
           GLLP  G
Sbjct: 742 GLLPDGG 748


>ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 40/70 (57%), Positives = 53/70 (75%)
 Frame = -1

Query: 245 AVTKSLFAEGMDKELGQVIRDVLKSCKLNDAEIAKVLVEVNEKEGNMDAVFNVLTEMAKD 66
           A+ KSL+ EG + EL Q++   LKSC++ +A +AKVL+ +N KEGNMDAVFNVL +MA  
Sbjct: 678 ALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALS 737

Query: 65  GLLPYSGRNV 36
           GLLPYS  N+
Sbjct: 738 GLLPYSSANL 747