BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040987
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15227.3| unnamed protein product [Vitis vinifera]              150   8e-35
ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containi...   150   8e-35
ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32
ref|XP_002328557.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containi...   135   5e-30

>emb|CBI15227.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  150 bits (380), Expect = 8e-35
 Identities = 72/97 (74%), Positives = 87/97 (89%)
 Frame = +3

Query: 6   RIKKSPGWSIIEVDKVVYSFVMGEGLNGVTEEANEKLVEIMSRIRIEGGYIPEVGSVLHD 185
           R+ K+PGWS+IEVDK++YSFV GE  N +TEEA EKL EIM ++R+EG YIPEVGSVLHD
Sbjct: 339 RMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGCYIPEVGSVLHD 398

Query: 186 IEEEEKENAVSMHSEKLAVAFGISRLCRGSIIRVVKN 296
           IE+EEKE++VS HSEKLAVAFGI+RLC+GSIIR+VKN
Sbjct: 399 IEDEEKEDSVSRHSEKLAVAFGIARLCKGSIIRIVKN 435


>ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 643

 Score =  150 bits (380), Expect = 8e-35
 Identities = 72/97 (74%), Positives = 87/97 (89%)
 Frame = +3

Query: 6   RIKKSPGWSIIEVDKVVYSFVMGEGLNGVTEEANEKLVEIMSRIRIEGGYIPEVGSVLHD 185
           R+ K+PGWS+IEVDK++YSFV GE  N +TEEA EKL EIM ++R+EG YIPEVGSVLHD
Sbjct: 503 RMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGCYIPEVGSVLHD 562

Query: 186 IEEEEKENAVSMHSEKLAVAFGISRLCRGSIIRVVKN 296
           IE+EEKE++VS HSEKLAVAFGI+RLC+GSIIR+VKN
Sbjct: 563 IEDEEKEDSVSRHSEKLAVAFGIARLCKGSIIRIVKN 599


>ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
           gi|449487109|ref|XP_004157499.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
          Length = 642

 Score =  142 bits (358), Expect = 3e-32
 Identities = 68/97 (70%), Positives = 85/97 (87%)
 Frame = +3

Query: 6   RIKKSPGWSIIEVDKVVYSFVMGEGLNGVTEEANEKLVEIMSRIRIEGGYIPEVGSVLHD 185
           R+KK+PGWS+IEV++++YSFV GE  N +  EA++KL EIMSR+RIEGGY+PEVGSVLHD
Sbjct: 502 RLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQKLREIMSRLRIEGGYVPEVGSVLHD 561

Query: 186 IEEEEKENAVSMHSEKLAVAFGISRLCRGSIIRVVKN 296
           IE EEKE++VS HSEKLAVAFG+++L RG  IRVVKN
Sbjct: 562 IEVEEKEDSVSQHSEKLAVAFGMAKLPRGRAIRVVKN 598


>ref|XP_002328557.1| predicted protein [Populus trichocarpa] gi|222838272|gb|EEE76637.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  140 bits (353), Expect = 1e-31
 Identities = 65/97 (67%), Positives = 83/97 (85%)
 Frame = +3

Query: 6   RIKKSPGWSIIEVDKVVYSFVMGEGLNGVTEEANEKLVEIMSRIRIEGGYIPEVGSVLHD 185
           RI K+PGWS+IEVDK++Y+F+ G     +TEEA +KL EI+ R+R+EGGY+PE+G VLHD
Sbjct: 503 RITKTPGWSMIEVDKIMYTFLAGTKQYKITEEAYKKLKEIIRRLRVEGGYVPEIGRVLHD 562

Query: 186 IEEEEKENAVSMHSEKLAVAFGISRLCRGSIIRVVKN 296
           IEEEEKE +VS+HSEKLAVAFGI+RLC+G  IR+VKN
Sbjct: 563 IEEEEKEGSVSVHSEKLAVAFGIARLCKGRTIRIVKN 599


>ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Glycine max]
          Length = 640

 Score =  135 bits (339), Expect = 5e-30
 Identities = 65/96 (67%), Positives = 81/96 (84%)
 Frame = +3

Query: 9   IKKSPGWSIIEVDKVVYSFVMGEGLNGVTEEANEKLVEIMSRIRIEGGYIPEVGSVLHDI 188
           +KK+PGWS+IE+DKV+Y FV GE  N VTEEA+EKL EIM R+R E GY P++ SVLHDI
Sbjct: 501 MKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREIMLRLRTEAGYAPQLRSVLHDI 560

Query: 189 EEEEKENAVSMHSEKLAVAFGISRLCRGSIIRVVKN 296
           EEEEKE++VS HSEKLA AFGI++L +G I+R+VKN
Sbjct: 561 EEEEKEDSVSKHSEKLAAAFGIAKLPKGRILRIVKN 596