BLASTX nr result
ID: Coptis25_contig00040959
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00040959
(710 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27422.3| unnamed protein product [Vitis vinifera] 239 1e-73
ref|XP_002314907.1| predicted protein [Populus trichocarpa] gi|2... 237 5e-68
ref|XP_002514555.1| menaquinone biosynthesis protein, putative [... 241 8e-68
ref|XP_002268761.2| PREDICTED: LOW QUALITY PROTEIN: protein PHYL... 239 1e-66
ref|NP_177055.2| 2-oxoglutarate decarboxylase/ hydro-lyase/ magn... 221 2e-65
>emb|CBI27422.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 239 bits (609), Expect(2) = 1e-73
Identities = 117/144 (81%), Positives = 131/144 (90%)
Frame = -3
Query: 432 MFATWSDGSRSSPLAVAASSHPRTTCISCFDECSLAFHAVGYARGSYKPAVVITSSGTAV 253
M+ + GSRSSPLA+AAS+HP TTCI+CFDE SLAFHA+GYARGS+KPAVVITSSGTAV
Sbjct: 85 MYFCVAPGSRSSPLAIAASTHPLTTCIACFDERSLAFHALGYARGSHKPAVVITSSGTAV 144
Query: 252 SNLLPAVVEASQDFVPLLLLTADRPPELQNAGANQAINQVNHFGSFVRSFFSLPAPTDHV 73
SNLLPAVVE+SQ FVPLLLLTADRPPEL +AGANQAINQVNHFGSFVR FF LP PTDH+
Sbjct: 145 SNLLPAVVESSQGFVPLLLLTADRPPELHDAGANQAINQVNHFGSFVRFFFGLPVPTDHI 204
Query: 72 PARMVLTTVDSAVYFATHAPSGPV 1
PARM+LTT+DSAVY+AT +P GPV
Sbjct: 205 PARMILTTLDSAVYWATSSPCGPV 228
Score = 63.9 bits (154), Expect(2) = 1e-73
Identities = 38/82 (46%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = -1
Query: 653 IPFILVITSPSTF---SSDLFLWSMQKEASTSSRFCFRLSSTTAVTRNVLDRPSEIRCLL 483
I F+ ++S F SSD F + KE S +FC RLS T N+LD E
Sbjct: 2 IVFVYDVSSIHFFPHSSSDCFYFLYFKETPFSCQFCIRLSPTVTAASNMLDHSGERTFSS 61
Query: 482 QYSANINAVWASLIIEECSRLG 417
Q ANINA+WASLIIEEC+R G
Sbjct: 62 QDYANINALWASLIIEECTRFG 83
>ref|XP_002314907.1| predicted protein [Populus trichocarpa] gi|222863947|gb|EEF01078.1|
predicted protein [Populus trichocarpa]
Length = 848
Score = 237 bits (604), Expect(2) = 5e-68
Identities = 118/144 (81%), Positives = 132/144 (91%)
Frame = -3
Query: 432 MFATWSDGSRSSPLAVAASSHPRTTCISCFDECSLAFHAVGYARGSYKPAVVITSSGTAV 253
M+ + GSRSSPLA+AAS+HP TTCISCFDE SLAFHAVGY++GS+KPAV+ITSSGTAV
Sbjct: 309 MYFCVAPGSRSSPLAIAASTHPLTTCISCFDERSLAFHAVGYSKGSHKPAVIITSSGTAV 368
Query: 252 SNLLPAVVEASQDFVPLLLLTADRPPELQNAGANQAINQVNHFGSFVRSFFSLPAPTDHV 73
SNLLPAVVEASQDFVPLLLLTADRPPEL +AGANQAINQVNHFGSFVR FSLPAPTD++
Sbjct: 369 SNLLPAVVEASQDFVPLLLLTADRPPELLDAGANQAINQVNHFGSFVRFTFSLPAPTDNI 428
Query: 72 PARMVLTTVDSAVYFATHAPSGPV 1
PARMVLTT+DSAV++AT P GPV
Sbjct: 429 PARMVLTTIDSAVHWATSLPYGPV 452
Score = 47.4 bits (111), Expect(2) = 5e-68
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = -1
Query: 533 AVTRNVLDRPSEIRCLLQYSANINAVWASLIIEECSRLG 417
A T +LD E LQ +NINAVWASLI+EECSRLG
Sbjct: 269 ADTTELLDDAGETSYSLQDQSNINAVWASLIVEECSRLG 307
>ref|XP_002514555.1| menaquinone biosynthesis protein, putative [Ricinus communis]
gi|223546159|gb|EEF47661.1| menaquinone biosynthesis
protein, putative [Ricinus communis]
Length = 1679
Score = 241 bits (615), Expect(2) = 8e-68
Identities = 120/137 (87%), Positives = 129/137 (94%)
Frame = -3
Query: 411 GSRSSPLAVAASSHPRTTCISCFDECSLAFHAVGYARGSYKPAVVITSSGTAVSNLLPAV 232
GSRSSPLA+AAS HP TTC++CFDE SLAFHAVGYARGS KPAVVITSSGTAVSNLLPAV
Sbjct: 349 GSRSSPLAIAASVHPLTTCVACFDERSLAFHAVGYARGSQKPAVVITSSGTAVSNLLPAV 408
Query: 231 VEASQDFVPLLLLTADRPPELQNAGANQAINQVNHFGSFVRSFFSLPAPTDHVPARMVLT 52
VEASQDFVPLLLLTADRPPELQNAGANQ+INQVNHFGSFVR FFSLPAPTD +PARMVLT
Sbjct: 409 VEASQDFVPLLLLTADRPPELQNAGANQSINQVNHFGSFVRCFFSLPAPTDSIPARMVLT 468
Query: 51 TVDSAVYFATHAPSGPV 1
T+DSAV++AT +P GPV
Sbjct: 469 TLDSAVHWATSSPYGPV 485
Score = 42.4 bits (98), Expect(2) = 8e-68
Identities = 22/37 (59%), Positives = 24/37 (64%)
Frame = -1
Query: 527 TRNVLDRPSEIRCLLQYSANINAVWASLIIEECSRLG 417
T +LD Q ANINAVWASLI+EECSRLG
Sbjct: 304 TFQMLDHVGGTNYSWQDYANINAVWASLIVEECSRLG 340
>ref|XP_002268761.2| PREDICTED: LOW QUALITY PROTEIN: protein PHYLLO, chloroplastic-like
[Vitis vinifera]
Length = 1614
Score = 239 bits (609), Expect(2) = 1e-66
Identities = 117/144 (81%), Positives = 131/144 (90%)
Frame = -3
Query: 432 MFATWSDGSRSSPLAVAASSHPRTTCISCFDECSLAFHAVGYARGSYKPAVVITSSGTAV 253
M+ + GSRSSPLA+AAS+HP TTCI+CFDE SLAFHA+GYARGS+KPAVVITSSGTAV
Sbjct: 271 MYFCVAPGSRSSPLAIAASTHPLTTCIACFDERSLAFHALGYARGSHKPAVVITSSGTAV 330
Query: 252 SNLLPAVVEASQDFVPLLLLTADRPPELQNAGANQAINQVNHFGSFVRSFFSLPAPTDHV 73
SNLLPAVVE+SQ FVPLLLLTADRPPEL +AGANQAINQVNHFGSFVR FF LP PTDH+
Sbjct: 331 SNLLPAVVESSQGFVPLLLLTADRPPELHDAGANQAINQVNHFGSFVRFFFGLPVPTDHI 390
Query: 72 PARMVLTTVDSAVYFATHAPSGPV 1
PARM+LTT+DSAVY+AT +P GPV
Sbjct: 391 PARMILTTLDSAVYWATSSPCGPV 414
Score = 40.8 bits (94), Expect(2) = 1e-66
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = -1
Query: 527 TRNVLDRPSEIRCLLQYSANINAVWASLIIEECSRLG 417
T +LD E Q ANINA+WASLIIEEC+R G
Sbjct: 233 TFKMLDHSGERTFSSQDYANINALWASLIIEECTRFG 269
>ref|NP_177055.2| 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding
protein [Arabidopsis thaliana]
gi|341941250|sp|Q15KI9.2|PHYLO_ARATH RecName:
Full=Protein PHYLLO, chloroplastic; Includes: RecName:
Full=Inactive isochorismate synthase; AltName:
Full=MENF; Includes: RecName:
Full=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
carboxylate synthase; AltName: Full=MEND; Includes:
RecName: Full=o-succinylbenzoate synthase; AltName:
Full=MENC; Includes: RecName:
Full=2-succinyl-6-hydroxy-2,
4-cyclohexadiene-1-carboxylate synthase; AltName:
Full=MENH; Flags: Precursor gi|332196734|gb|AEE34855.1|
2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion
binding protein [Arabidopsis thaliana]
Length = 1715
Score = 221 bits (563), Expect(2) = 2e-65
Identities = 107/137 (78%), Positives = 124/137 (90%)
Frame = -3
Query: 411 GSRSSPLAVAASSHPRTTCISCFDECSLAFHAVGYARGSYKPAVVITSSGTAVSNLLPAV 232
GSRSS LA+AA++HP TTC++CFDE SLAFHA+GYA+GS KPAV+ITSSGTAVSNLLPAV
Sbjct: 387 GSRSSHLAIAAANHPLTTCLACFDERSLAFHAIGYAKGSLKPAVIITSSGTAVSNLLPAV 446
Query: 231 VEASQDFVPLLLLTADRPPELQNAGANQAINQVNHFGSFVRSFFSLPAPTDHVPARMVLT 52
VEAS+DF+PLLLLTADRPPELQ GANQAINQ+NHFGSFVR FF+LP PTD +P RMVLT
Sbjct: 447 VEASEDFLPLLLLTADRPPELQGVGANQAINQINHFGSFVRFFFNLPPPTDLIPVRMVLT 506
Query: 51 TVDSAVYFATHAPSGPV 1
TVDSA+++AT + GPV
Sbjct: 507 TVDSALHWATGSACGPV 523
Score = 54.7 bits (130), Expect(2) = 2e-65
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = -1
Query: 584 KEASTSSRFCFRLSSTTAVTRNVLDRPSEIRCLLQYSANINAVWASLIIEECSRLG 417
K +S +F +LS + N+L+R +E+ L+ ANINAVWAS IIEEC+RLG
Sbjct: 323 KSIQSSCQFHCKLSPDVVFSNNMLNRETEVSNFLRDEANINAVWASAIIEECTRLG 378