BLASTX nr result

ID: Coptis25_contig00040951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040951
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327484.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_002305261.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus...   146   1e-33
emb|CBI20026.3| unnamed protein product [Vitis vinifera]              144   6e-33
ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containi...   144   6e-33

>ref|XP_002327484.1| predicted protein [Populus trichocarpa] gi|222836038|gb|EEE74459.1|
           predicted protein [Populus trichocarpa]
          Length = 486

 Score =  149 bits (375), Expect = 3e-34
 Identities = 65/82 (79%), Positives = 73/82 (89%)
 Frame = -3

Query: 246 NDDWYWLYAAVSSKCLLVTNDEMRDHLFQLLGTSFFPRWKEKHQVRYTASREGVSLQMPP 67
           NDDWYWLYAAV  KCLLVTNDEMRDHLFQLLGTSFFPRWKEKHQVR + SR G++LQMPP
Sbjct: 388 NDDWYWLYAAVCYKCLLVTNDEMRDHLFQLLGTSFFPRWKEKHQVRLSVSRSGIALQMPP 447

Query: 66  LYSMVIQESERGNWHIPMVTSE 1
            YS+VIQESE G+WH+P  T++
Sbjct: 448 PYSIVIQESENGSWHVPTTTND 469


>ref|XP_002305261.1| predicted protein [Populus trichocarpa] gi|222848225|gb|EEE85772.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score =  148 bits (374), Expect = 4e-34
 Identities = 65/82 (79%), Positives = 71/82 (86%)
 Frame = -3

Query: 246 NDDWYWLYAAVSSKCLLVTNDEMRDHLFQLLGTSFFPRWKEKHQVRYTASREGVSLQMPP 67
           NDDWYWLYAAVS KCLLVTNDEMRDHLFQLLGTSFFPRWKEKHQVR + SR G++L MPP
Sbjct: 418 NDDWYWLYAAVSCKCLLVTNDEMRDHLFQLLGTSFFPRWKEKHQVRLSVSRSGIALHMPP 477

Query: 66  LYSMVIQESERGNWHIPMVTSE 1
            YS+VIQESE G WH+P  T +
Sbjct: 478 PYSIVIQESENGGWHVPTTTGD 499


>ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223534642|gb|EEF36338.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 589

 Score =  146 bits (369), Expect = 1e-33
 Identities = 63/82 (76%), Positives = 72/82 (87%)
 Frame = -3

Query: 246 NDDWYWLYAAVSSKCLLVTNDEMRDHLFQLLGTSFFPRWKEKHQVRYTASREGVSLQMPP 67
           NDDWYWLYAAVS  CLLVTNDEMRDHLFQLLGTSFFPRWKEKHQVR + SR G++L MPP
Sbjct: 488 NDDWYWLYAAVSCNCLLVTNDEMRDHLFQLLGTSFFPRWKEKHQVRLSVSRSGIALHMPP 547

Query: 66  LYSMVIQESERGNWHIPMVTSE 1
            YS+VIQESE G+WH+P ++ +
Sbjct: 548 PYSIVIQESENGSWHVPTISED 569


>emb|CBI20026.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  144 bits (364), Expect = 6e-33
 Identities = 64/82 (78%), Positives = 71/82 (86%)
 Frame = -3

Query: 246 NDDWYWLYAAVSSKCLLVTNDEMRDHLFQLLGTSFFPRWKEKHQVRYTASREGVSLQMPP 67
           NDDWYWLYAAV+  CLLVTNDEMRDHLFQLLGTSFFPRWKEKHQVR T +R G  L MPP
Sbjct: 233 NDDWYWLYAAVNCNCLLVTNDEMRDHLFQLLGTSFFPRWKEKHQVRLTITRRGPVLHMPP 292

Query: 66  LYSMVIQESERGNWHIPMVTSE 1
            YS+VIQESE+G+WH+P VT +
Sbjct: 293 PYSIVIQESEQGSWHVPTVTGD 314


>ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 526

 Score =  144 bits (364), Expect = 6e-33
 Identities = 64/82 (78%), Positives = 71/82 (86%)
 Frame = -3

Query: 246 NDDWYWLYAAVSSKCLLVTNDEMRDHLFQLLGTSFFPRWKEKHQVRYTASREGVSLQMPP 67
           NDDWYWLYAAV+  CLLVTNDEMRDHLFQLLGTSFFPRWKEKHQVR T +R G  L MPP
Sbjct: 420 NDDWYWLYAAVNCNCLLVTNDEMRDHLFQLLGTSFFPRWKEKHQVRLTITRRGPVLHMPP 479

Query: 66  LYSMVIQESERGNWHIPMVTSE 1
            YS+VIQESE+G+WH+P VT +
Sbjct: 480 PYSIVIQESEQGSWHVPTVTGD 501


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