BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040934
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003571515.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g...    78   8e-13
ref|XP_002533738.1| conserved hypothetical protein [Ricinus comm...    77   2e-12
emb|CAE04218.2| OSJNBa0064D20.2 [Oryza sativa Japonica Group]          74   9e-12
emb|CAE02503.1| P0076O17.1 [Oryza sativa Japonica Group] gi|3248...    74   9e-12
gb|EEC77336.1| hypothetical protein OsI_16014 [Oryza sativa Indi...    74   9e-12

>ref|XP_003571515.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g53840-like
           [Brachypodium distachyon]
          Length = 409

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
 Frame = +3

Query: 42  ISSLEQSLVHHILSFMDMKQVVQTSLLSKRWRNVWHSLRILNFDEESWRSSRNDNKLNKG 221
           IS+L   L+HHI+SF+  ++ V T LLS+RW+NVW S+R LN D   + S          
Sbjct: 14  ISTLPDELLHHIMSFLQAREAVHTCLLSRRWQNVWPSVRFLNMDAAKFAS--------LA 65

Query: 222 KFKFFVDTVLLLRDGSDIDTFNLFF-----SSAHFGDFDRIDRWVAYGMERSV 365
           +FK FVD  LL R  + +DT  L        S++F D+ +I  WV + +  +V
Sbjct: 66  QFKKFVDNFLLHRCCTSLDTLWLRIIYDDSGSSYFSDYSQIQPWVCHALRSNV 118


>ref|XP_002533738.1| conserved hypothetical protein [Ricinus communis]
           gi|223526344|gb|EEF28641.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 539

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 49/138 (35%), Positives = 69/138 (50%), Gaps = 22/138 (15%)
 Frame = +3

Query: 18  TTMKAENRISSLEQSLVHHILSFMDMKQVVQTSLLSKRWRNVWHSLRILNFDE------- 176
           TT +  + IS+L + L+ HILSF+ +KQ +  SLLS++W+ +W  + ILN +E       
Sbjct: 27  TTSEGIDYISNLLEVLILHILSFLPLKQWIVVSLLSRQWKYLWTKISILNLNEIEIISNI 86

Query: 177 --------------ESWRSSRNDNKLNKGKFKFFVDTVLLLRDGSDIDTFNL-FFSSAHF 311
                          S+R   +     + KF  FVD +LLL  GS IDT  L F    H 
Sbjct: 87  MKKDIFCPLCGDIPSSYRCLHHSRYAARSKFVEFVDRMLLLHSGSVIDTMRLSFLYDFHD 146

Query: 312 GDFDRIDRWVAYGMERSV 365
           G   RID WV Y +  +V
Sbjct: 147 GYNQRIDTWVRYALASNV 164


>emb|CAE04218.2| OSJNBa0064D20.2 [Oryza sativa Japonica Group]
          Length = 388

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 48/121 (39%), Positives = 70/121 (57%), Gaps = 10/121 (8%)
 Frame = +3

Query: 30  AENRISSLEQSLVHHILSFMDMKQVVQTSLLSKRWRNVWHSLRILNFDE-------ESWR 188
           A +R+S+L  +L+H ILS +  +Q+VQTS+LSKRWR++W S+  L+ D+       E+W 
Sbjct: 37  ATDRLSALPDALLHTILSSLKGRQMVQTSVLSKRWRHLWRSVPCLDIDQREFAAASENWA 96

Query: 189 SSRNDNKLNKGKFKFFVDTVLLLRDGS--DIDTFNL-FFSSAHFGDFDRIDRWVAYGMER 359
            SR+D +    KF+ F D VL  R GS   +DTF L      H       DRW+  G++ 
Sbjct: 97  ISRSDLE----KFEDFADNVLAYRCGSPAKLDTFRLRICDRYHSLRSSDTDRWIRRGLKC 152

Query: 360 S 362
           S
Sbjct: 153 S 153


>emb|CAE02503.1| P0076O17.1 [Oryza sativa Japonica Group]
           gi|32487385|emb|CAE03138.1| OJ000114_01.19 [Oryza sativa
           Japonica Group]
          Length = 384

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 48/121 (39%), Positives = 70/121 (57%), Gaps = 10/121 (8%)
 Frame = +3

Query: 30  AENRISSLEQSLVHHILSFMDMKQVVQTSLLSKRWRNVWHSLRILNFDE-------ESWR 188
           A +R+S+L  +L+H ILS +  +Q+VQTS+LSKRWR++W S+  L+ D+       E+W 
Sbjct: 33  ATDRLSALPDALLHTILSSLKGRQMVQTSVLSKRWRHLWRSVPCLDIDQREFAAASENWA 92

Query: 189 SSRNDNKLNKGKFKFFVDTVLLLRDGS--DIDTFNL-FFSSAHFGDFDRIDRWVAYGMER 359
            SR+D +    KF+ F D VL  R GS   +DTF L      H       DRW+  G++ 
Sbjct: 93  ISRSDLE----KFEDFADNVLAYRCGSPAKLDTFRLRICDRYHSLRSSDTDRWIRRGLKC 148

Query: 360 S 362
           S
Sbjct: 149 S 149


>gb|EEC77336.1| hypothetical protein OsI_16014 [Oryza sativa Indica Group]
           gi|222629559|gb|EEE61691.1| hypothetical protein
           OsJ_16165 [Oryza sativa Japonica Group]
          Length = 352

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 48/121 (39%), Positives = 70/121 (57%), Gaps = 10/121 (8%)
 Frame = +3

Query: 30  AENRISSLEQSLVHHILSFMDMKQVVQTSLLSKRWRNVWHSLRILNFDE-------ESWR 188
           A +R+S+L  +L+H ILS +  +Q+VQTS+LSKRWR++W S+  L+ D+       E+W 
Sbjct: 33  ATDRLSALPDALLHTILSSLKGRQMVQTSVLSKRWRHLWRSVPCLDIDQREFAAASENWA 92

Query: 189 SSRNDNKLNKGKFKFFVDTVLLLRDGS--DIDTFNL-FFSSAHFGDFDRIDRWVAYGMER 359
            SR+D +    KF+ F D VL  R GS   +DTF L      H       DRW+  G++ 
Sbjct: 93  ISRSDLE----KFEDFADNVLAYRCGSPAKLDTFRLRICDRYHSLRSSDTDRWIRRGLKC 148

Query: 360 S 362
           S
Sbjct: 149 S 149