BLASTX nr result

ID: Coptis25_contig00040921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040921
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320015.1| 1-aminocyclopropane-1-carboxylate [Populus t...    81   1e-13
ref|XP_002510038.1| acc synthase, putative [Ricinus communis] gi...    80   1e-13
ref|NP_001234026.1| 1-aminocyclopropane-1-carboxylate synthase 3...    80   2e-13
sp|Q42881.1|1A13_SOLLC RecName: Full=1-aminocyclopropane-1-carbo...    80   2e-13
ref|XP_002868965.1| 1-amino-cyclopropane-1-carboxylate synthase ...    79   3e-13

>ref|XP_002320015.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa]
           gi|222860788|gb|EEE98330.1|
           1-aminocyclopropane-1-carboxylate [Populus trichocarpa]
          Length = 468

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
 Frame = -2

Query: 304 TEPGWFRVCFANMSEETLLLSLQRIKAFVASIAPVQSTRSNTHLRPMGHSRRMSLSKWVF 125
           TEPGWFRVCFANMSEETL L++QR+K+FV S+    +  + +H + + ++RR SL+KWV 
Sbjct: 400 TEPGWFRVCFANMSEETLNLAIQRLKSFVESM----NINNQSHHQLLKNARRKSLAKWVL 455

Query: 124 RLS-SHDYEPE 95
           RLS  HD EPE
Sbjct: 456 RLSFDHDREPE 466


>ref|XP_002510038.1| acc synthase, putative [Ricinus communis]
           gi|223550739|gb|EEF52225.1| acc synthase, putative
           [Ricinus communis]
          Length = 463

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
 Frame = -2

Query: 304 TEPGWFRVCFANMSEETLLLSLQRIKAFVASIAPVQSTRSN----THLRPMGHSRRMSLS 137
           +EPGWFR+CFANMSEETL ++++RIK+FV SI  + +T SN    T+   M   +R+ ++
Sbjct: 389 SEPGWFRMCFANMSEETLTVAMERIKSFVESIIAITTTSSNRQRKTNYHQMISDQRVHIN 448

Query: 136 KWVFRLSSHDYEPER 92
           KWV +LSSHD  P R
Sbjct: 449 KWVSKLSSHDLVPLR 463


>ref|NP_001234026.1| 1-aminocyclopropane-1-carboxylate synthase 3 [Solanum lycopersicum]
           gi|1561694|gb|AAB48945.1| ACC synthase [Solanum
           lycopersicum]
          Length = 469

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/71 (56%), Positives = 51/71 (71%)
 Frame = -2

Query: 304 TEPGWFRVCFANMSEETLLLSLQRIKAFVASIAPVQSTRSNTHLRPMGHSRRMSLSKWVF 125
           TEPGWFRVCFANMSE+TL L+++RIK FV S AP  +T      +   +S++ S SKWVF
Sbjct: 400 TEPGWFRVCFANMSEDTLDLAMRRIKDFVESTAP-NATNHQNQQQSNANSKKKSFSKWVF 458

Query: 124 RLSSHDYEPER 92
           RLS +D + ER
Sbjct: 459 RLSFNDRQRER 469


>sp|Q42881.1|1A13_SOLLC RecName: Full=1-aminocyclopropane-1-carboxylate synthase 3;
           Short=ACC synthase 3; AltName: Full=Le-ACS3;
           Short=ACS-3; AltName: Full=S-adenosyl-L-methionine
           methylthioadenosine-lyase 3 gi|508609|gb|AAA78789.1|
           1-aminocyclopropane-1-carboxylate synthase [Solanum
           lycopersicum] gi|1561696|gb|AAB48946.1| ACC synthase
           [Solanum lycopersicum]
          Length = 469

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/71 (56%), Positives = 51/71 (71%)
 Frame = -2

Query: 304 TEPGWFRVCFANMSEETLLLSLQRIKAFVASIAPVQSTRSNTHLRPMGHSRRMSLSKWVF 125
           TEPGWFRVCFANMSE+TL L+++RIK FV S AP  +T      +   +S++ S SKWVF
Sbjct: 400 TEPGWFRVCFANMSEDTLDLAMRRIKDFVESTAP-NATNHQNQQQSNANSKKKSFSKWVF 458

Query: 124 RLSSHDYEPER 92
           RLS +D + ER
Sbjct: 459 RLSFNDRQRER 469


>ref|XP_002868965.1| 1-amino-cyclopropane-1-carboxylate synthase 8 [Arabidopsis lyrata
           subsp. lyrata] gi|297314801|gb|EFH45224.1|
           1-amino-cyclopropane-1-carboxylate synthase 8
           [Arabidopsis lyrata subsp. lyrata]
          Length = 469

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/69 (56%), Positives = 48/69 (69%)
 Frame = -2

Query: 301 EPGWFRVCFANMSEETLLLSLQRIKAFVASIAPVQSTRSNTHLRPMGHSRRMSLSKWVFR 122
           EPGWFRVCFANMSEETL ++L R+K FV    P  + RS    + + + R+M +S WVFR
Sbjct: 401 EPGWFRVCFANMSEETLKVALDRLKGFVD--GPSSTRRSQIEHQRLKNLRKMKVSNWVFR 458

Query: 121 LSSHDYEPE 95
           LS HD EPE
Sbjct: 459 LSFHDREPE 467


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