BLASTX nr result

ID: Coptis25_contig00040909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040909
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280898.2| PREDICTED: uncharacterized protein LOC100260...    59   3e-07
emb|CBI16121.3| unnamed protein product [Vitis vinifera]               59   3e-07
ref|NP_567176.2| XH/XS domain-containing protein [Arabidopsis th...    59   4e-07
gb|AAF02798.1|AF195115_18 F5I10.22 gene product [Arabidopsis tha...    59   4e-07
ref|XP_004165825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    58   7e-07

>ref|XP_002280898.2| PREDICTED: uncharacterized protein LOC100260350 [Vitis vinifera]
          Length = 713

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 4/60 (6%)
 Frame = -3

Query: 200 KDTRNE----VHNAVKSALLEMNEKYFRGRHIISELWNFKEGSRETLKEGIQSMLEITRI 33
           KD +NE    V+ AV  AL EMNE    GR+++SELWNFKEG + TL+EG++ +L+  R+
Sbjct: 648 KDLQNEYGDEVYMAVTDALKEMNEYNPSGRYVVSELWNFKEGRKATLREGVEDILKQWRL 707


>emb|CBI16121.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 4/60 (6%)
 Frame = -3

Query: 200 KDTRNE----VHNAVKSALLEMNEKYFRGRHIISELWNFKEGSRETLKEGIQSMLEITRI 33
           KD +NE    V+ AV  AL EMNE    GR+++SELWNFKEG + TL+EG++ +L+  R+
Sbjct: 561 KDLQNEYGDEVYMAVTDALKEMNEYNPSGRYVVSELWNFKEGRKATLREGVEDILKQWRL 620


>ref|NP_567176.2| XH/XS domain-containing protein [Arabidopsis thaliana]
           gi|332656471|gb|AEE81871.1| XH/XS domain-containing
           protein [Arabidopsis thaliana]
          Length = 635

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/42 (69%), Positives = 33/42 (78%)
 Frame = -3

Query: 185 EVHNAVKSALLEMNEKYFRGRHIISELWNFKEGSRETLKEGI 60
           EVHNAVK+AL+EMNE    GR+  SELWNFKEG + TLKE I
Sbjct: 579 EVHNAVKAALVEMNEYNASGRYPTSELWNFKEGRKATLKEVI 620


>gb|AAF02798.1|AF195115_18 F5I10.22 gene product [Arabidopsis thaliana]
           gi|2252841|gb|AAB62840.1| A_IG005I10.22 gene product
           [Arabidopsis thaliana] gi|7267125|emb|CAB80796.1|
           AT4g00380 [Arabidopsis thaliana]
          Length = 662

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/42 (69%), Positives = 33/42 (78%)
 Frame = -3

Query: 185 EVHNAVKSALLEMNEKYFRGRHIISELWNFKEGSRETLKEGI 60
           EVHNAVK+AL+EMNE    GR+  SELWNFKEG + TLKE I
Sbjct: 606 EVHNAVKAALVEMNEYNASGRYPTSELWNFKEGRKATLKEVI 647


>ref|XP_004165825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101228650 [Cucumis sativus]
          Length = 754

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = -3

Query: 188 NEVHNAVKSALLEMNEKYFRGRHIISELWNFKEGSRETLKEGIQSMLE 45
           +EVH AV +AL+EMNE    GR+I+ ELWNFKE  + TLKEG+  +L+
Sbjct: 697 DEVHKAVVTALMEMNEYNPSGRYIVPELWNFKEDRKATLKEGVAHILK 744


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