BLASTX nr result

ID: Coptis25_contig00040885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040885
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18535.3| unnamed protein product [Vitis vinifera]              133   1e-29
ref|XP_002266212.1| PREDICTED: DELLA protein RGL2 [Vitis vinifera]    133   1e-29
emb|CAN77508.1| hypothetical protein VITISV_037741 [Vitis vinifera]   133   1e-29
ref|XP_002327229.1| GRAS family transcription factor [Populus tr...   131   5e-29
ref|XP_002326001.1| GRAS family transcription factor [Populus tr...   131   7e-29

>emb|CBI18535.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/85 (76%), Positives = 76/85 (89%)
 Frame = -2

Query: 259 GKGLQLIHLLLISATAVDDRNIESAAQNLYQLYQHVSLSGDSVQRVAAYFADGLSARLLT 80
           GKGL LIHLLLI+ATAVD+ N+  AA+NL +LYQ V L+GDSVQRV AYFADGL+A+LLT
Sbjct: 19  GKGLHLIHLLLITATAVDENNVSVAAENLRELYQSVCLNGDSVQRVVAYFADGLAAKLLT 78

Query: 79  RKSPFYDMIIKDPTPEEEFLAFTEL 5
           RKSPFYDMI+K+PTPEEEFLA T+L
Sbjct: 79  RKSPFYDMIMKEPTPEEEFLAHTDL 103


>ref|XP_002266212.1| PREDICTED: DELLA protein RGL2 [Vitis vinifera]
          Length = 455

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/85 (76%), Positives = 76/85 (89%)
 Frame = -2

Query: 259 GKGLQLIHLLLISATAVDDRNIESAAQNLYQLYQHVSLSGDSVQRVAAYFADGLSARLLT 80
           GKGL LIHLLLI+ATAVD+ N+  AA+NL +LYQ V L+GDSVQRV AYFADGL+A+LLT
Sbjct: 71  GKGLHLIHLLLITATAVDENNVSVAAENLRELYQSVCLNGDSVQRVVAYFADGLAAKLLT 130

Query: 79  RKSPFYDMIIKDPTPEEEFLAFTEL 5
           RKSPFYDMI+K+PTPEEEFLA T+L
Sbjct: 131 RKSPFYDMIMKEPTPEEEFLAHTDL 155


>emb|CAN77508.1| hypothetical protein VITISV_037741 [Vitis vinifera]
          Length = 419

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/85 (76%), Positives = 76/85 (89%)
 Frame = -2

Query: 259 GKGLQLIHLLLISATAVDDRNIESAAQNLYQLYQHVSLSGDSVQRVAAYFADGLSARLLT 80
           GKGL LIHLLLI+ATAVD+ N+  AA+NL +LYQ V L+GDSVQRV AYFADGL+A+LLT
Sbjct: 71  GKGLHLIHLLLITATAVDENNVSVAAENLRELYQSVCLNGDSVQRVVAYFADGLAAKLLT 130

Query: 79  RKSPFYDMIIKDPTPEEEFLAFTEL 5
           RKSPFYDMI+K+PTPEEEFLA T+L
Sbjct: 131 RKSPFYDMIMKEPTPEEEFLAHTDL 155


>ref|XP_002327229.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222835599|gb|EEE74034.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 463

 Score =  131 bits (330), Expect = 5e-29
 Identities = 64/85 (75%), Positives = 75/85 (88%)
 Frame = -2

Query: 259 GKGLQLIHLLLISATAVDDRNIESAAQNLYQLYQHVSLSGDSVQRVAAYFADGLSARLLT 80
           GKGL LIHLLLI+ATA D+ N+ SA +NL +LYQ VS +GDSVQRV AYFADGL+ARLLT
Sbjct: 78  GKGLHLIHLLLITATAADENNVGSALENLTELYQSVSFTGDSVQRVVAYFADGLAARLLT 137

Query: 79  RKSPFYDMIIKDPTPEEEFLAFTEL 5
           +KSPFYDMI+K+PT EEEFLAFT+L
Sbjct: 138 KKSPFYDMIMKEPTSEEEFLAFTDL 162


>ref|XP_002326001.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222862876|gb|EEF00383.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 463

 Score =  131 bits (329), Expect = 7e-29
 Identities = 65/85 (76%), Positives = 76/85 (89%)
 Frame = -2

Query: 259 GKGLQLIHLLLISATAVDDRNIESAAQNLYQLYQHVSLSGDSVQRVAAYFADGLSARLLT 80
           GKGL LIHLLLI+ATA+D+ N+ SA +NL +LYQ VSLSGDSVQRV AYFADGL+ARLL 
Sbjct: 77  GKGLHLIHLLLIAATALDENNVGSALENLTELYQSVSLSGDSVQRVVAYFADGLAARLLG 136

Query: 79  RKSPFYDMIIKDPTPEEEFLAFTEL 5
           +KSPFYDMI+K+PT EEEFLAFT+L
Sbjct: 137 KKSPFYDMIMKEPTCEEEFLAFTDL 161


Top