BLASTX nr result

ID: Coptis25_contig00040884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040884
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270564.1| PREDICTED: multidrug and toxin extrusion pro...   148   5e-34
emb|CAN68577.1| hypothetical protein VITISV_019282 [Vitis vinifera]   148   5e-34
ref|XP_002516950.1| multidrug resistance pump, putative [Ricinus...   145   3e-33
ref|XP_002314374.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
ref|XP_004170014.1| PREDICTED: LOW QUALITY PROTEIN: MATE efflux ...   144   1e-32

>ref|XP_002270564.1| PREDICTED: multidrug and toxin extrusion protein 1 [Vitis vinifera]
           gi|296083343|emb|CBI22979.3| unnamed protein product
           [Vitis vinifera]
          Length = 500

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/84 (82%), Positives = 76/84 (90%)
 Frame = +3

Query: 6   LGEEWGTLIRLAVPSCIGVCLEWWWYEFMTILAGYLHEPHITLAASAIVIQTTSLMYALP 185
           LGEEWG L+RLA+PSC+ VCLEWWWYEFMTILAGYL +P I LA SAIVIQTT+LMY LP
Sbjct: 246 LGEEWGMLLRLAIPSCLAVCLEWWWYEFMTILAGYLSKPRIALATSAIVIQTTALMYTLP 305

Query: 186 SALSASVSTRVGNELGAGRPCQAR 257
           +ALSASVSTRVGNELGAGRP +AR
Sbjct: 306 TALSASVSTRVGNELGAGRPGRAR 329


>emb|CAN68577.1| hypothetical protein VITISV_019282 [Vitis vinifera]
          Length = 536

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/84 (82%), Positives = 76/84 (90%)
 Frame = +3

Query: 6   LGEEWGTLIRLAVPSCIGVCLEWWWYEFMTILAGYLHEPHITLAASAIVIQTTSLMYALP 185
           LGEEWG L+RLA+PSC+ VCLEWWWYEFMTILAGYL +P I LA SAIVIQTT+LMY LP
Sbjct: 246 LGEEWGMLLRLAIPSCLAVCLEWWWYEFMTILAGYLSKPRIALATSAIVIQTTALMYTLP 305

Query: 186 SALSASVSTRVGNELGAGRPCQAR 257
           +ALSASVSTRVGNELGAGRP +AR
Sbjct: 306 TALSASVSTRVGNELGAGRPGRAR 329


>ref|XP_002516950.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223544038|gb|EEF45564.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 503

 Score =  145 bits (367), Expect = 3e-33
 Identities = 67/84 (79%), Positives = 76/84 (90%)
 Frame = +3

Query: 6   LGEEWGTLIRLAVPSCIGVCLEWWWYEFMTILAGYLHEPHITLAASAIVIQTTSLMYALP 185
           LG+EWG L+RL++PSCI VCLEWWWYEFMTILAGYL +P + LA SAIVIQTTSL+Y LP
Sbjct: 248 LGKEWGILLRLSIPSCIAVCLEWWWYEFMTILAGYLSKPRVALATSAIVIQTTSLLYTLP 307

Query: 186 SALSASVSTRVGNELGAGRPCQAR 257
           +ALSASVSTRVGNELGAGRP +AR
Sbjct: 308 TALSASVSTRVGNELGAGRPGKAR 331


>ref|XP_002314374.1| predicted protein [Populus trichocarpa] gi|222863414|gb|EEF00545.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  145 bits (365), Expect = 4e-33
 Identities = 67/84 (79%), Positives = 74/84 (88%)
 Frame = +3

Query: 6   LGEEWGTLIRLAVPSCIGVCLEWWWYEFMTILAGYLHEPHITLAASAIVIQTTSLMYALP 185
           L +EWG L+RLA+PSCI VCLEWWWYEFMTILAGYLH P   LA SAI+IQTTSLMY LP
Sbjct: 228 LRKEWGILLRLAIPSCIAVCLEWWWYEFMTILAGYLHNPQAALATSAIIIQTTSLMYTLP 287

Query: 186 SALSASVSTRVGNELGAGRPCQAR 257
           ++LSASVSTRVGNELGAGRP +AR
Sbjct: 288 TSLSASVSTRVGNELGAGRPQKAR 311


>ref|XP_004170014.1| PREDICTED: LOW QUALITY PROTEIN: MATE efflux family protein 7-like
           [Cucumis sativus]
          Length = 510

 Score =  144 bits (362), Expect = 1e-32
 Identities = 66/84 (78%), Positives = 74/84 (88%)
 Frame = +3

Query: 6   LGEEWGTLIRLAVPSCIGVCLEWWWYEFMTILAGYLHEPHITLAASAIVIQTTSLMYALP 185
           +GEEWG LI+LA+PSC+GVCLEWWWYEFMTIL GYL+ P I LA S IVIQTTSLMY LP
Sbjct: 253 VGEEWGMLIKLAIPSCLGVCLEWWWYEFMTILTGYLYNPRIALATSGIVIQTTSLMYTLP 312

Query: 186 SALSASVSTRVGNELGAGRPCQAR 257
            ALSA+VSTRVG+ELGAGRP +AR
Sbjct: 313 MALSAAVSTRVGHELGAGRPRKAR 336


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