BLASTX nr result

ID: Coptis25_contig00040881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040881
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519938.1| electron carrier, putative [Ricinus communis...   275   3e-72
ref|XP_002328753.1| predicted protein [Populus trichocarpa] gi|2...   270   2e-70
ref|XP_003612495.1| GMC-type oxidoreductase, putative [Medicago ...   265   4e-69
ref|XP_003534338.1| PREDICTED: long-chain-alcohol oxidase FAO4A-...   263   1e-68
ref|XP_003517097.1| PREDICTED: long-chain-alcohol oxidase FAO4A-...   261   6e-68

>ref|XP_002519938.1| electron carrier, putative [Ricinus communis]
            gi|223540984|gb|EEF42542.1| electron carrier, putative
            [Ricinus communis]
          Length = 710

 Score =  275 bits (704), Expect = 3e-72
 Identities = 137/194 (70%), Positives = 152/194 (78%)
 Frame = -2

Query: 584  KNSKIGRHLHIHPVIMAWGYFPTNASLVWPDEKKNSYDGPIITAMSTTVANFDSSGYGAV 405
            KN  IGR+LH+HPV MAWGYFP      WP+ +K SY+G I+TAMST VANFD SGYGAV
Sbjct: 459  KNPNIGRNLHLHPVTMAWGYFPE----AWPEVEKKSYEGGIMTAMSTVVANFDKSGYGAV 514

Query: 404  IQTPSLHPGMFSILTPWVSSIDYKKRMSRYSRTAHIFALARDKGSGDVRQFPNSLTYQFD 225
            IQTPSLHPGMFS L PWVS  D K +M RYSRTAHIFAL RDKGSG V   P+S+TYQ  
Sbjct: 515  IQTPSLHPGMFSSLMPWVSGADIKMQMCRYSRTAHIFALGRDKGSGTVNS-PSSITYQMK 573

Query: 224  SKDEKNLMNGLEKVLRILAAAGAEEIGTHHLKGDRLNVKHASTKEFEKFISEASTRGIKD 45
            + DEKNL NG+EK+LRILAAAGAEEIGTHH  G RLNVK AS  EFEKF+ E   R ++D
Sbjct: 574  AADEKNLQNGIEKILRILAAAGAEEIGTHHCIGRRLNVKTASYHEFEKFVKEERARPMRD 633

Query: 44   LSNPICSAHQMGSC 3
            LSN ICSAHQMGSC
Sbjct: 634  LSNQICSAHQMGSC 647


>ref|XP_002328753.1| predicted protein [Populus trichocarpa] gi|222839051|gb|EEE77402.1|
            predicted protein [Populus trichocarpa]
          Length = 748

 Score =  270 bits (689), Expect = 2e-70
 Identities = 129/196 (65%), Positives = 155/196 (79%), Gaps = 2/196 (1%)
 Frame = -2

Query: 584  KNSKIGRHLHIHPVIMAWGYFPTN--ASLVWPDEKKNSYDGPIITAMSTTVANFDSSGYG 411
            KN+ IG+HLH+HPV MAWGYFP    ++  WP+E+K SY+G I+TAMST VAN + SGYG
Sbjct: 489  KNANIGKHLHLHPVTMAWGYFPEAPISTTAWPEEQKKSYEGGIMTAMSTVVANVNKSGYG 548

Query: 410  AVIQTPSLHPGMFSILTPWVSSIDYKKRMSRYSRTAHIFALARDKGSGDVRQFPNSLTYQ 231
            AVIQTPSLHPGMFS L PW+S  D K+RM R+SRTAH+FALARD+GSG V   P+S+ Y+
Sbjct: 549  AVIQTPSLHPGMFSGLIPWISGADMKRRMCRFSRTAHVFALARDRGSGTVNS-PSSINYR 607

Query: 230  FDSKDEKNLMNGLEKVLRILAAAGAEEIGTHHLKGDRLNVKHASTKEFEKFISEASTRGI 51
             D++DEKNL  GLEK LRILAAAGAEEIGTHH  G  LNVK  S +EFE+F+ E S R +
Sbjct: 608  MDAEDEKNLQEGLEKTLRILAAAGAEEIGTHHSTGKSLNVKKVSYREFERFVKEESARPL 667

Query: 50   KDLSNPICSAHQMGSC 3
            +DL+  ICSAHQMGSC
Sbjct: 668  RDLTGQICSAHQMGSC 683


>ref|XP_003612495.1| GMC-type oxidoreductase, putative [Medicago truncatula]
            gi|355513830|gb|AES95453.1| GMC-type oxidoreductase,
            putative [Medicago truncatula]
          Length = 853

 Score =  265 bits (677), Expect = 4e-69
 Identities = 128/200 (64%), Positives = 158/200 (79%), Gaps = 6/200 (3%)
 Frame = -2

Query: 584  KNSKIGRHLHIHPVIMAWGYFP------TNASLVWPDEKKNSYDGPIITAMSTTVANFDS 423
            KN+ IGR+LH+HPV+MAWGYFP      T AS VWP+  K SY+G I+TAMS  VA F+ 
Sbjct: 591  KNNNIGRNLHLHPVVMAWGYFPDTPVEPTGASEVWPETWKKSYEGGIMTAMSPVVAEFEK 650

Query: 422  SGYGAVIQTPSLHPGMFSILTPWVSSIDYKKRMSRYSRTAHIFALARDKGSGDVRQFPNS 243
            SGYGAVIQTP+LHPG FSI+ PWVS  D K RM ++SRTAHIFALARD+GSG+V   P+ 
Sbjct: 651  SGYGAVIQTPALHPGTFSIVMPWVSGSDIKDRMRKFSRTAHIFALARDQGSGNVHS-PSR 709

Query: 242  LTYQFDSKDEKNLMNGLEKVLRILAAAGAEEIGTHHLKGDRLNVKHASTKEFEKFISEAS 63
            ++Y+ +  DE+NL  G++KVLRILAAAGAEEIGTHH KG+ LNVK+AS  EFE+F+ + S
Sbjct: 710  ISYEMEDVDEENLQKGIDKVLRILAAAGAEEIGTHHNKGNTLNVKNASYHEFEQFVKKES 769

Query: 62   TRGIKDLSNPICSAHQMGSC 3
            +R + DLS P+CSAHQMGSC
Sbjct: 770  SRSLTDLSTPLCSAHQMGSC 789


>ref|XP_003534338.1| PREDICTED: long-chain-alcohol oxidase FAO4A-like [Glycine max]
          Length = 748

 Score =  263 bits (673), Expect = 1e-68
 Identities = 128/195 (65%), Positives = 154/195 (78%), Gaps = 1/195 (0%)
 Frame = -2

Query: 584  KNSKIGRHLHIHPVIMAWGYFP-TNASLVWPDEKKNSYDGPIITAMSTTVANFDSSGYGA 408
            +N  IG++LH+HPV+MAWGYFP    S VWP+  K SY+G I+TAMST VA F+ SGYGA
Sbjct: 491  RNQNIGKNLHLHPVVMAWGYFPDAPESEVWPEAYKKSYEGGIMTAMSTVVAEFEQSGYGA 550

Query: 407  VIQTPSLHPGMFSILTPWVSSIDYKKRMSRYSRTAHIFALARDKGSGDVRQFPNSLTYQF 228
            VIQTPSLHPGMFSI+TPW S ID + RM ++SRTAHIFALARD+GSG V+  P+ ++Y+ 
Sbjct: 551  VIQTPSLHPGMFSIVTPWTSGIDIRDRMRKFSRTAHIFALARDQGSGTVKA-PDRISYKP 609

Query: 227  DSKDEKNLMNGLEKVLRILAAAGAEEIGTHHLKGDRLNVKHASTKEFEKFISEASTRGIK 48
               DE+NL  G+EKVLRILAAAGAEEIGTHH KG  LNVK  S  EFEKF+ E S+R + 
Sbjct: 610  ADVDEENLKKGIEKVLRILAAAGAEEIGTHHNKGRTLNVKQVSYHEFEKFVKEESSRSLT 669

Query: 47   DLSNPICSAHQMGSC 3
            DL+ P+CSAHQMGSC
Sbjct: 670  DLTTPLCSAHQMGSC 684


>ref|XP_003517097.1| PREDICTED: long-chain-alcohol oxidase FAO4A-like [Glycine max]
          Length = 809

 Score =  261 bits (667), Expect = 6e-68
 Identities = 128/195 (65%), Positives = 152/195 (77%), Gaps = 1/195 (0%)
 Frame = -2

Query: 584  KNSKIGRHLHIHPVIMAWGYFP-TNASLVWPDEKKNSYDGPIITAMSTTVANFDSSGYGA 408
            +N  IGR+LH+HPV MAWGYFP    S VWP+  K SY+G I+TAMST VA F+ SGYGA
Sbjct: 552  RNQNIGRNLHLHPVAMAWGYFPDAPESEVWPEAYKKSYEGGIMTAMSTVVAEFEQSGYGA 611

Query: 407  VIQTPSLHPGMFSILTPWVSSIDYKKRMSRYSRTAHIFALARDKGSGDVRQFPNSLTYQF 228
            VIQTPSLHPGMFSI+TPW S ID + RM ++SRTAHIFALARD+GSG V+  P+ ++Y+ 
Sbjct: 612  VIQTPSLHPGMFSIVTPWTSGIDIRDRMRKFSRTAHIFALARDQGSGTVKA-PDRISYKP 670

Query: 227  DSKDEKNLMNGLEKVLRILAAAGAEEIGTHHLKGDRLNVKHASTKEFEKFISEASTRGIK 48
               DE+NL  G+EKVLRILAAAGAEEIGTHH KG  LNVK     EFEKF+ E S+R + 
Sbjct: 671  AGVDEENLKKGIEKVLRILAAAGAEEIGTHHNKGRTLNVKQVRYHEFEKFVKEESSRSLT 730

Query: 47   DLSNPICSAHQMGSC 3
            DL+ P+CSAHQMGSC
Sbjct: 731  DLTTPLCSAHQMGSC 745


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