BLASTX nr result

ID: Coptis25_contig00040868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040868
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314990.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002314990.1| predicted protein [Populus trichocarpa] gi|222864030|gb|EEF01161.1|
           predicted protein [Populus trichocarpa]
          Length = 1851

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/87 (33%), Positives = 52/87 (59%)
 Frame = -1

Query: 261 KKDTEEMRNSILKLENGCWKTVDPGPSDADLLTNAGGGIKRLSLTGKLEELNRDLKEARI 82
           KK   ++R  +L+  + C +  +    +  L+      IK   L  KL++LN+DL+EAR 
Sbjct: 601 KKKDNKVREPVLESGSNCLELHNLKEQNEVLVMEGSREIKSNPLQAKLDKLNKDLEEARS 660

Query: 81  LNKRFLDVQASQIFRQNEFKQVCQEVE 1
           LN  + + QAS++++Q++ + VC+EVE
Sbjct: 661 LNYHYQEDQASKLYQQHQAELVCEEVE 687


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