BLASTX nr result

ID: Coptis25_contig00040848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040848
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298131.1| 2-oxoglutarate-dependent dioxygenase [Populu...   117   7e-25
ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis v...   113   2e-23
emb|CAN80139.1| hypothetical protein VITISV_028513 [Vitis vinifera]   113   2e-23
ref|XP_002517546.1| Gibberellin 20 oxidase, putative [Ricinus co...   112   2e-23
ref|XP_002298127.1| 2-oxoglutarate-dependent dioxygenase [Populu...   111   7e-23

>ref|XP_002298131.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
           gi|222845389|gb|EEE82936.1| 2-oxoglutarate-dependent
           dioxygenase [Populus trichocarpa]
          Length = 313

 Score =  117 bits (294), Expect = 7e-25
 Identities = 57/115 (49%), Positives = 79/115 (68%)
 Frame = -2

Query: 353 HFCLG*FSQTTFSFISKLSKMEEMVKRMVFESFGVKYHFEPLGESTSYLLRLMKYRPPTI 174
           HFC     +T  S+   +S++E+MV RMVFES+GV  H +   EST+YL R+MKYR P  
Sbjct: 124 HFC-----KTVLSYSMLVSELEQMVVRMVFESYGVYQHHDSHKESTTYLFRMMKYRGPEK 178

Query: 173 NESNIGIVTHTDTSFFTILGQNHINGLEIQGNNGEWITVIPSASSFIVMIGDACM 9
           NE+N+G   HTD SF T+L QN ++GLE++  +G+W+   PS SSFIVM G+A +
Sbjct: 179 NEANVGCDAHTDKSFITVLHQNQVSGLEVKSKDGQWMGFKPSPSSFIVMAGEALL 233


>ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis vinifera]
           gi|297743336|emb|CBI36203.3| unnamed protein product
           [Vitis vinifera]
          Length = 311

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/115 (48%), Positives = 80/115 (69%)
 Frame = -2

Query: 353 HFCLG*FSQTTFSFISKLSKMEEMVKRMVFESFGVKYHFEPLGESTSYLLRLMKYRPPTI 174
           HFC     +T  S+   +S++E+MVK+MVFES+  + +++   +ST+YLLRL+KYR P  
Sbjct: 122 HFC-----ETVLSYSKLVSELEQMVKKMVFESYDAEKYYDSHIQSTTYLLRLIKYRGPQK 176

Query: 173 NESNIGIVTHTDTSFFTILGQNHINGLEIQGNNGEWITVIPSASSFIVMIGDACM 9
           NE+ IG   HTD SF T+L QN + GLEI+  +GEWI+  PS SS++VM GDA +
Sbjct: 177 NETCIGTSCHTDKSFITVLHQNEVCGLEIRTKDGEWISFKPSPSSYVVMAGDALL 231


>emb|CAN80139.1| hypothetical protein VITISV_028513 [Vitis vinifera]
          Length = 311

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/115 (48%), Positives = 80/115 (69%)
 Frame = -2

Query: 353 HFCLG*FSQTTFSFISKLSKMEEMVKRMVFESFGVKYHFEPLGESTSYLLRLMKYRPPTI 174
           HFC     +T  S+   +S++E+MVK+MVFES+  + +++   +ST+YLLRL+KYR P  
Sbjct: 122 HFC-----ETVLSYSKLVSELEQMVKKMVFESYDAEKYYDSHIQSTTYLLRLIKYRGPQK 176

Query: 173 NESNIGIVTHTDTSFFTILGQNHINGLEIQGNNGEWITVIPSASSFIVMIGDACM 9
           NE+ IG   HTD SF T+L QN + GLEI+  +GEWI+  PS SS++VM GDA +
Sbjct: 177 NETCIGTSCHTDKSFITVLHQNEVCGLEIRTKDGEWISFKPSPSSYVVMAGDALL 231


>ref|XP_002517546.1| Gibberellin 20 oxidase, putative [Ricinus communis]
           gi|223543178|gb|EEF44710.1| Gibberellin 20 oxidase,
           putative [Ricinus communis]
          Length = 321

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/110 (48%), Positives = 77/110 (70%), Gaps = 1/110 (0%)
 Frame = -2

Query: 335 FSQTTFSFISKLSKMEEMVKRMVFESFGVKYHFEPLGESTSYLLRLMKYRPPTINESNIG 156
           F +T FS+   ++++E+MV RMVFE +GV+Y ++   E T+YL R+MKYR PT  ES++G
Sbjct: 125 FCKTVFSYSKWVAELEQMVTRMVFEGYGVQYSYDTQQERTNYLFRMMKYRAPTEGESDLG 184

Query: 155 IVTHTDTSFFTILGQNHINGLEIQGNNGEWITVIPSA-SSFIVMIGDACM 9
              HTD  F T+L QN ++GLE+Q  +G+W+   PS+ SSFIVM  DA +
Sbjct: 185 CDVHTDKGFITVLHQNEVSGLEVQTKDGQWVCFEPSSPSSFIVMAADALL 234


>ref|XP_002298127.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
           gi|222845385|gb|EEE82932.1| 2-oxoglutarate-dependent
           dioxygenase [Populus trichocarpa]
          Length = 313

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/109 (50%), Positives = 76/109 (69%)
 Frame = -2

Query: 335 FSQTTFSFISKLSKMEEMVKRMVFESFGVKYHFEPLGESTSYLLRLMKYRPPTINESNIG 156
           F +    + +  ++++ MV RMVFES+GV+ + +   EST+YLLRL+K RPP ++E N+G
Sbjct: 125 FCECVLKYANLAAELDRMVTRMVFESYGVEKYHDSYVESTTYLLRLLKNRPPKVDEHNLG 184

Query: 155 IVTHTDTSFFTILGQNHINGLEIQGNNGEWITVIPSASSFIVMIGDACM 9
            VTHTD SF TIL QN INGLE+   +G+ I V  S SSF+V+ GDA M
Sbjct: 185 FVTHTDKSFTTILHQNEINGLEVDTKDGKKINVELSPSSFVVIAGDALM 233


Top