BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040839
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001062158.1| Os08g0500600 [Oryza sativa Japonica Group] g...   105   3e-21
gb|EAZ43233.1| hypothetical protein OsJ_27833 [Oryza sativa Japo...   105   3e-21
gb|EAZ07511.1| hypothetical protein OsI_29767 [Oryza sativa Indi...   105   3e-21
ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containi...   101   7e-20
ref|XP_002445933.1| hypothetical protein SORBIDRAFT_07g028280 [S...   101   7e-20

>ref|NP_001062158.1| Os08g0500600 [Oryza sativa Japonica Group]
           gi|42407356|dbj|BAD08817.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|42407750|dbj|BAD08896.1| pentatricopeptide
           (PPR) repeat-containing protein-like [Oryza sativa
           Japonica Group] gi|113624127|dbj|BAF24072.1|
           Os08g0500600 [Oryza sativa Japonica Group]
          Length = 429

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/83 (59%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = +1

Query: 1   CMISGYARRNRSEDAMKLFQNMVDESRVRPNEVTLVSVLSVCGHFTALDQGKWVHTYIER 180
           CMISGYA+  R +D ++LF+ M  ES V+PNEVT+VSVLS C + TAL++G+WVH +I++
Sbjct: 155 CMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDK 214

Query: 181 NGMRLSD--NLGAALVDMYAKCG 243
           + M L++  NLGAAL+DMYAKCG
Sbjct: 215 HKMVLNNEYNLGAALIDMYAKCG 237


>gb|EAZ43233.1| hypothetical protein OsJ_27833 [Oryza sativa Japonica Group]
          Length = 567

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/83 (59%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = +1

Query: 1   CMISGYARRNRSEDAMKLFQNMVDESRVRPNEVTLVSVLSVCGHFTALDQGKWVHTYIER 180
           CMISGYA+  R +D ++LF+ M  ES V+PNEVT+VSVLS C + TAL++G+WVH +I++
Sbjct: 293 CMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDK 352

Query: 181 NGMRLSD--NLGAALVDMYAKCG 243
           + M L++  NLGAAL+DMYAKCG
Sbjct: 353 HKMVLNNEYNLGAALIDMYAKCG 375


>gb|EAZ07511.1| hypothetical protein OsI_29767 [Oryza sativa Indica Group]
          Length = 567

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/83 (59%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = +1

Query: 1   CMISGYARRNRSEDAMKLFQNMVDESRVRPNEVTLVSVLSVCGHFTALDQGKWVHTYIER 180
           CMISGYA+  R +D ++LF+ M  ES V+PNEVT+VSVLS C + TAL++G+WVH +I++
Sbjct: 293 CMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDK 352

Query: 181 NGMRLSD--NLGAALVDMYAKCG 243
           + M L++  NLGAAL+DMYAKCG
Sbjct: 353 HKMVLNNEYNLGAALIDMYAKCG 375


>ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 632

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/82 (58%), Positives = 58/82 (70%)
 Frame = +1

Query: 4   MISGYARRNRSEDAMKLFQNMVDESRVRPNEVTLVSVLSVCGHFTALDQGKWVHTYIERN 183
           MISGYAR  +  DA++LF+ M  E  + PN+VTLVSVLS C H  ALD GKW+H +I RN
Sbjct: 230 MISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRN 289

Query: 184 GMRLSDNLGAALVDMYAKCGCV 249
            + +   LG AL DMYAKCGCV
Sbjct: 290 KIEVGLFLGNALADMYAKCGCV 311


>ref|XP_002445933.1| hypothetical protein SORBIDRAFT_07g028280 [Sorghum bicolor]
           gi|241942283|gb|EES15428.1| hypothetical protein
           SORBIDRAFT_07g028280 [Sorghum bicolor]
          Length = 498

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/83 (55%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
 Frame = +1

Query: 1   CMISGYARRNRSEDAMKLFQNMVDESRVRPNEVTLVSVLSVCGHFTALDQGKWVHTYIER 180
           CMISGYA+  R    ++LF+ M     +RPNEVT+VSVLS C H TAL++G+W H +I++
Sbjct: 291 CMISGYAQAGRYAQTLELFRTMQSHGDIRPNEVTMVSVLSACAHLTALEEGRWAHVFIDK 350

Query: 181 NGMRLSD--NLGAALVDMYAKCG 243
           + M L +  NLGAAL+DMYAKCG
Sbjct: 351 HKMVLDNEFNLGAALIDMYAKCG 373