BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040819
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV31288.1| putative polyprotein [Oryza sativa Japonica Group]     150   1e-34
gb|ABA97812.1| retrotransposon protein, putative, Ty3-gypsy subc...   148   5e-34
gb|ABA92233.1| retrotransposon protein, putative, Ty3-gypsy subc...   148   5e-34
gb|ABA92240.1| retrotransposon protein, putative, Ty3-gypsy subc...   148   5e-34
gb|AAM74253.1|AC074355_15 Putative retroelement [Oryza sativa Ja...   148   5e-34

>gb|AAV31288.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1625

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/111 (64%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
 Frame = +2

Query: 2    DIAEYIAKCVTCQQVKAEHRKPAWTLQPLHVPEWKWDYISVYFRDGLP-TSQGKNSIWVI 178
            +IAEY+A C  CQ+VKAEHRKPA  LQPL +PEWKW+ I + F  GLP TS G +SIWV+
Sbjct: 1135 EIAEYVALCDVCQRVKAEHRKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVV 1194

Query: 179  VDRLTKSAHFLPVKTTYTTNVLAGIYLSEIVKLHDFPISIVSDRGAQFTSR 331
            VDRLTK AHF+PVKTTYT N LA +Y++ +V LH  P  IVSDRG+QFTS+
Sbjct: 1195 VDRLTKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKIVSDRGSQFTSK 1245



 Score =  139 bits (350), Expect = 2e-31
 Identities = 70/110 (63%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
 Frame = +2

Query: 2   DIAEYIAKCVTCQQVKAEHRKPAWTLQPLHVPEWKWDYISVYFRDGLP-TSQGKNSIWVI 178
           +IAEY+A C  CQ+VKAEH+KPA  LQPL +PEWK + I + F  GLP TS G +SIWVI
Sbjct: 463 EIAEYVAVCDVCQRVKAEHQKPASLLQPLKIPEWKREEIGMDFITGLPRTSSGHDSIWVI 522

Query: 179 VDRLTKSAHFLPVKTTYTTNVLAGIYLSEIVKLHDFPISIVSDRGAQFTS 328
           VDRLTK AHF+PVKTTY+ + LA +Y++ IV LH  P  IVSDRG+QFTS
Sbjct: 523 VDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGIPKKIVSDRGSQFTS 572


>gb|ABA97812.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1702

 Score =  148 bits (373), Expect = 5e-34
 Identities = 71/111 (63%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
 Frame = +2

Query: 2    DIAEYIAKCVTCQQVKAEHRKPAWTLQPLHVPEWKWDYISVYFRDGLP-TSQGKNSIWVI 178
            +IAEY+A C  CQ+VKAEH+KPA  LQPL +PEWKW+ I + F  GLP TS G +SIWV+
Sbjct: 1306 EIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVV 1365

Query: 179  VDRLTKSAHFLPVKTTYTTNVLAGIYLSEIVKLHDFPISIVSDRGAQFTSR 331
            VDRLTK AHF+PVKTTYT N LA +Y++ +V LH  P  IVSDRG+QFTS+
Sbjct: 1366 VDRLTKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKIVSDRGSQFTSK 1416


>gb|ABA92233.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1483

 Score =  148 bits (373), Expect = 5e-34
 Identities = 71/111 (63%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
 Frame = +2

Query: 2    DIAEYIAKCVTCQQVKAEHRKPAWTLQPLHVPEWKWDYISVYFRDGLP-TSQGKNSIWVI 178
            +IAEY+A C  CQ+VKAEH+KPA  LQPL +PEWKW+ I + F  GLP TS G +SIWV+
Sbjct: 1087 EIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVV 1146

Query: 179  VDRLTKSAHFLPVKTTYTTNVLAGIYLSEIVKLHDFPISIVSDRGAQFTSR 331
            VDRLTK AHF+PVKTTYT N LA +Y++ +V LH  P  IVSDRG+QFTS+
Sbjct: 1147 VDRLTKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKIVSDRGSQFTSK 1197


>gb|ABA92240.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1319

 Score =  148 bits (373), Expect = 5e-34
 Identities = 71/111 (63%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
 Frame = +2

Query: 2    DIAEYIAKCVTCQQVKAEHRKPAWTLQPLHVPEWKWDYISVYFRDGLP-TSQGKNSIWVI 178
            +IAEY+A C  CQ+VKAEH+KPA  LQPL +PEWKW+ I + F  GLP TS G +SIWV+
Sbjct: 1085 EIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVV 1144

Query: 179  VDRLTKSAHFLPVKTTYTTNVLAGIYLSEIVKLHDFPISIVSDRGAQFTSR 331
            VDRLTK AHF+PVKTTYT N LA +Y++ +V LH  P  IVSDRG+QFTS+
Sbjct: 1145 VDRLTKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKIVSDRGSQFTSK 1195


>gb|AAM74253.1|AC074355_15 Putative retroelement [Oryza sativa Japonica Group]
            gi|31430430|gb|AAP52347.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1140

 Score =  148 bits (373), Expect = 5e-34
 Identities = 71/111 (63%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
 Frame = +2

Query: 2    DIAEYIAKCVTCQQVKAEHRKPAWTLQPLHVPEWKWDYISVYFRDGLP-TSQGKNSIWVI 178
            +IAEY+A C  CQ+VKAEH+KPA  LQPL +PEWKW+ I + F  GLP TS G +SIWV+
Sbjct: 918  EIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVV 977

Query: 179  VDRLTKSAHFLPVKTTYTTNVLAGIYLSEIVKLHDFPISIVSDRGAQFTSR 331
            VDRLTK AHF+PVKTTYT N LA +Y++ +V LH  P  IVSDRG+QFTS+
Sbjct: 978  VDRLTKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKIVSDRGSQFTSK 1028