BLASTX nr result

ID: Coptis25_contig00040773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040773
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308036.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
gb|ABK93319.1| unknown [Populus trichocarpa]                           69   3e-10
ref|XP_002529631.1| guanylate kinase, putative [Ricinus communis...    68   9e-10
gb|AAG12251.1|AF205130_1 guanylate kinase [Nicotiana tabacum]          61   8e-08
ref|XP_002323313.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_002308036.1| predicted protein [Populus trichocarpa] gi|222854012|gb|EEE91559.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/53 (62%), Positives = 45/53 (84%), Gaps = 1/53 (1%)
 Frame = +1

Query: 1   VLIHCGTTELGKASNKSFVLDASSLKGGAPGRTRGMNMYSVNS-SNGLNGLHR 156
           V+I+CGT EL KAS    VLD SSLKGGAPGRTRG+++Y+++S S+GLNG+++
Sbjct: 347 VIINCGTPELKKASKNLIVLDVSSLKGGAPGRTRGLDVYAIDSFSDGLNGINQ 399


>gb|ABK93319.1| unknown [Populus trichocarpa]
          Length = 401

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/53 (62%), Positives = 45/53 (84%), Gaps = 1/53 (1%)
 Frame = +1

Query: 1   VLIHCGTTELGKASNKSFVLDASSLKGGAPGRTRGMNMYSVNS-SNGLNGLHR 156
           V+I+CGT EL KAS    VLD SSLKGGAPGRTRG+++Y+++S S+GLNG+++
Sbjct: 347 VIINCGTPELKKASKNLIVLDVSSLKGGAPGRTRGLDVYAIDSFSDGLNGINQ 399


>ref|XP_002529631.1| guanylate kinase, putative [Ricinus communis]
           gi|223530916|gb|EEF32776.1| guanylate kinase, putative
           [Ricinus communis]
          Length = 402

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/52 (59%), Positives = 45/52 (86%), Gaps = 1/52 (1%)
 Frame = +1

Query: 1   VLIHCGTTELGKASNKSFVLDASSLKGGAPGRTRGMNMYSVNS-SNGLNGLH 153
           ++I+CGT EL KAS    +LDASSLKGGAPGRTRG+++++++S S+GLNG++
Sbjct: 348 IIINCGTPELEKASKSFIILDASSLKGGAPGRTRGLDVHAIDSFSDGLNGIN 399


>gb|AAG12251.1|AF205130_1 guanylate kinase [Nicotiana tabacum]
          Length = 297

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
 Frame = +1

Query: 1   VLIHCGTTELGKASNKSFVLDASSLKGGAPGRTRGMNMYSVN-SSNGLNG 147
           +LI+CG  E  KASN  + LD S LKGG+PGRTRG+N+Y VN S++ +NG
Sbjct: 243 ILINCGAAEYHKASNNMYALDLSLLKGGSPGRTRGLNLYVVNPSTDRVNG 292


>ref|XP_002323313.1| predicted protein [Populus trichocarpa] gi|222867943|gb|EEF05074.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/53 (56%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
 Frame = +1

Query: 1   VLIHCGTTELGKASNKSFVLDASSLKGGAPGRTRGMNMYSVNS-SNGLNGLHR 156
           ++I+ GT EL KAS    VLD SSLKGGAPGRTRG+++Y+ +S S+ LNG+++
Sbjct: 349 IIINYGTPELEKASKSLIVLDVSSLKGGAPGRTRGLDVYATDSFSDDLNGINQ 401


Top