BLASTX nr result

ID: Coptis25_contig00040765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040765
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU02588.1| pectate lyase-like protein 3 [Vitis vinifera]          125   3e-27
ref|XP_002265853.1| PREDICTED: probable pectate lyase 12 [Vitis ...   125   3e-27
ref|XP_004173339.1| PREDICTED: LOW QUALITY PROTEIN: probable pec...   124   6e-27
ref|XP_004150371.1| PREDICTED: probable pectate lyase 12-like [C...   124   6e-27
ref|XP_004173516.1| PREDICTED: probable pectate lyase 12-like, p...   124   1e-26

>gb|ADU02588.1| pectate lyase-like protein 3 [Vitis vinifera]
          Length = 489

 Score =  125 bits (315), Expect = 3e-27
 Identities = 61/99 (61%), Positives = 67/99 (67%)
 Frame = +2

Query: 2   GCITIQYVSXXXXXXXXXXXCVPSPVANVRSSTTHYGRRTXXXXXXXXXXXXXXXWIDHC 181
           GCIT+QY+S           CV S  ANVRSS THYG RT               WIDHC
Sbjct: 195 GCITLQYISNVIIHNIHIHHCVQSGEANVRSSPTHYGWRTLSDGDGISIFGSRDIWIDHC 254

Query: 182 SLSYCTDGLIDAIMGSSGITISNNYFSHHDEVMLLGHSD 298
           SLS+C DGLIDA+MGS+GITISNN+FSHHDEVMLLGHSD
Sbjct: 255 SLSHCKDGLIDAVMGSTGITISNNFFSHHDEVMLLGHSD 293


>ref|XP_002265853.1| PREDICTED: probable pectate lyase 12 [Vitis vinifera]
          Length = 583

 Score =  125 bits (315), Expect = 3e-27
 Identities = 61/99 (61%), Positives = 67/99 (67%)
 Frame = +2

Query: 2   GCITIQYVSXXXXXXXXXXXCVPSPVANVRSSTTHYGRRTXXXXXXXXXXXXXXXWIDHC 181
           GCIT+QY+S           CV S  ANVRSS THYG RT               WIDHC
Sbjct: 289 GCITLQYISNVIIHNIHIHHCVQSGEANVRSSPTHYGWRTLSDGDGISIFGSRDIWIDHC 348

Query: 182 SLSYCTDGLIDAIMGSSGITISNNYFSHHDEVMLLGHSD 298
           SLS+C DGLIDA+MGS+GITISNN+FSHHDEVMLLGHSD
Sbjct: 349 SLSHCKDGLIDAVMGSTGITISNNFFSHHDEVMLLGHSD 387


>ref|XP_004173339.1| PREDICTED: LOW QUALITY PROTEIN: probable pectate lyase 12-like,
           partial [Cucumis sativus]
          Length = 418

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/99 (60%), Positives = 65/99 (65%)
 Frame = +2

Query: 2   GCITIQYVSXXXXXXXXXXXCVPSPVANVRSSTTHYGRRTXXXXXXXXXXXXXXXWIDHC 181
           GCIT+QY+S           CVP+   N+RSS TH G R                WIDHC
Sbjct: 179 GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 238

Query: 182 SLSYCTDGLIDAIMGSSGITISNNYFSHHDEVMLLGHSD 298
           SLSYCTDGLIDAIMGS+GITISNNYFSHHDEVMLLGH D
Sbjct: 239 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDD 277


>ref|XP_004150371.1| PREDICTED: probable pectate lyase 12-like [Cucumis sativus]
          Length = 489

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/99 (60%), Positives = 65/99 (65%)
 Frame = +2

Query: 2   GCITIQYVSXXXXXXXXXXXCVPSPVANVRSSTTHYGRRTXXXXXXXXXXXXXXXWIDHC 181
           GCIT+QY+S           CVP+   N+RSS TH G R                WIDHC
Sbjct: 179 GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 238

Query: 182 SLSYCTDGLIDAIMGSSGITISNNYFSHHDEVMLLGHSD 298
           SLSYCTDGLIDAIMGS+GITISNNYFSHHDEVMLLGH D
Sbjct: 239 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDD 277


>ref|XP_004173516.1| PREDICTED: probable pectate lyase 12-like, partial [Cucumis
           sativus]
          Length = 370

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/99 (61%), Positives = 65/99 (65%)
 Frame = +2

Query: 2   GCITIQYVSXXXXXXXXXXXCVPSPVANVRSSTTHYGRRTXXXXXXXXXXXXXXXWIDHC 181
           GCITIQYVS           C PS  AN+RS+ TH G R                WIDHC
Sbjct: 131 GCITIQYVSNVIIHNVHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHC 190

Query: 182 SLSYCTDGLIDAIMGSSGITISNNYFSHHDEVMLLGHSD 298
           SLSYCTDGLIDAIMGS+GITISN+YFSHHDEVMLLGH D
Sbjct: 191 SLSYCTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDD 229


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