BLASTX nr result

ID: Coptis25_contig00040761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040761
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Viti...    59   5e-07
emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]    59   5e-07

>ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
           gi|302142156|emb|CBI19359.3| unnamed protein product
           [Vitis vinifera]
          Length = 430

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
 Frame = +3

Query: 273 MGDNGNHDLGFKLSNEKKLNSRPSEMYME--SENIVRTILSSELLPKSSNGADLIFSTGW 446
           MG + N ++GF  +++  LN   S M     SE +    +SS  + KSSNG D  F +GW
Sbjct: 1   MGIDDNGNMGFPNTSQSILNCPSSGMNTHPISEKVTGMTMSSASMYKSSNGGDPFFGSGW 60

Query: 447 D----LSQNVEFKGSALGSHNPISVSPFSVAMLETQGTNGT 557
           D    LSQN  F GS++ SH+  + S + V +LE QG   T
Sbjct: 61  DPIVSLSQNENFGGSSMVSHSEFANSAYPV-VLENQGIGST 100


>emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]
          Length = 484

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
 Frame = +3

Query: 273 MGDNGNHDLGFKLSNEKKLNSRPSEMYME--SENIVRTILSSELLPKSSNGADLIFSTGW 446
           MG + N ++GF  +++  LN   S M     SE +    +SS  + KSSNG D  F +GW
Sbjct: 1   MGIDDNGNMGFPNTSQSILNCPSSGMNTHPISEKVTGMTMSSASMYKSSNGGDPFFGSGW 60

Query: 447 D----LSQNVEFKGSALGSHNPISVSPFSVAMLETQGTNGT 557
           D    LSQN  F GS++ SH+  + S + V +LE QG   T
Sbjct: 61  DPIVSLSQNENFGGSSMVSHSEFANSAYPV-VLENQGIGST 100


Top