BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040755
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    58   8e-11
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    55   4e-10
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    53   4e-08
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    52   7e-08
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    48   1e-06

>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 58.2 bits (139), Expect(2) = 8e-11
 Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
 Frame = +3

Query: 114 DRFYLVEISGHLHLVARALDKDYN------APEGVFRYVTDWFEVYRLDFSAKKWIELTE 275
           D  YLV     L LV R LD +Y        P  ++R +   FEV+RLD++  +W+ ++ 
Sbjct: 255 DMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIR--FEVFRLDWNGPQWLRMST 312

Query: 276 FGDNSLFIGTNSSFAISTTEY 338
            GD +LFIG NSS ++S T++
Sbjct: 313 LGDKALFIGENSSLSLSATDF 333



 Score = 33.1 bits (74), Expect(2) = 8e-11
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 2   DILFFNGRFYAIQASGILRICEIDEPVPK 88
           D++F NG FYA+  +G + IC+I    P+
Sbjct: 214 DVIFVNGMFYAVNKAGQIVICDISSDSPR 242


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 55.1 bits (131), Expect(2) = 4e-10
 Identities = 32/73 (43%), Positives = 40/73 (54%)
 Frame = +3

Query: 114 DRFYLVEISGHLHLVARALDKDYNAPEGVFRYVTDWFEVYRLDFSAKKWIELTEFGDNSL 293
           D  YLV     L LV R LD D      +F Y T  FEV++LD +  +W  +T  GD  L
Sbjct: 256 DMQYLVSSGDGLLLVTRYLDLDVEFD--IFIYKTARFEVFKLDLNGPRWERVTSLGDMML 313

Query: 294 FIGTNSSFAISTT 332
           FIG NSS A+S +
Sbjct: 314 FIGENSSLALSAS 326



 Score = 33.9 bits (76), Expect(2) = 4e-10
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = +2

Query: 2   DILFFNGRFYAIQASGILRICEIDEPVPK 88
           D+++FNG FYA+  +G + +C+++   PK
Sbjct: 215 DVIYFNGLFYAVNKAGQIVVCDVNGNSPK 243


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 53.1 bits (126), Expect(2) = 4e-08
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
 Frame = +3

Query: 114 DRFYLVEISGHLHLVARALDKDYNAP--EGVFRYVTDWFEVYRLDFSAKKWIELTEFGDN 287
           D  YLVE    L LV R LD  Y+    +    Y T  F+V RLD  A +W  ++  GD 
Sbjct: 252 DLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDR 311

Query: 288 SLFIGTNSSFAISTTEYP 341
           +LF+G N S ++S+ ++P
Sbjct: 312 ALFLGENLSLSLSSVDFP 329



 Score = 28.9 bits (63), Expect(2) = 4e-08
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 2   DILFFNGRFYAIQASGILRICEIDEPVPK 88
           D++F  G FYA+   G + +C++    P+
Sbjct: 211 DVIFHRGLFYAVNKYGSIAVCDVSGSSPR 239


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 52.4 bits (124), Expect(2) = 7e-08
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
 Frame = +3

Query: 114 DRFYLVEISGHLHLVARALDKDYNAP--EGVFRYVTDWFEVYRLDFSAKKWIELTEFGDN 287
           D  YLVE    L LV R LD  Y+    +    Y T  F+V RLD  A +W  ++  GD 
Sbjct: 252 DLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDR 311

Query: 288 SLFIGTNSSFAISTTEYP 341
           +LF+G N S ++S+ ++P
Sbjct: 312 ALFLGENLSLSLSSVDFP 329



 Score = 28.9 bits (63), Expect(2) = 7e-08
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 2   DILFFNGRFYAIQASGILRICEIDEPVPK 88
           D++F  G FYA+   G + +C++    P+
Sbjct: 211 DVIFHRGLFYAVNKYGSIAVCDVSGSSPR 239


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 47.8 bits (112), Expect(2) = 1e-06
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = +3

Query: 123  YLVEISGHLHLVARALDKDYNAPEGVFRYVTDW-FEVYRLDFSAKKWIELTEFGDNSLFI 299
            YLVE  G +++V R L   Y+       Y+  W F V +LD   K+W E+      S F+
Sbjct: 1161 YLVESGGEIYMVTRNL---YDTARRDIPYMRTWTFSVLKLDMCNKRWEEVENLDHCSFFL 1217

Query: 300  GTNSSFAISTTEYP 341
            G N SF+   ++YP
Sbjct: 1218 GNNHSFSTWASDYP 1231



 Score = 29.6 bits (65), Expect(2) = 1e-06
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 2    DILFFNGRFYAIQASGILRICEIDEPVPKTI 94
            DI++FNG F A+  S  + IC+I     KTI
Sbjct: 1111 DIIYFNGSFLAVNLSWEVWICDISGSQLKTI 1141