BLASTX nr result

ID: Coptis25_contig00040754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040754
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_179990.1| putative leucine-rich repeat transmembrane prot...   161   6e-38
ref|XP_002309364.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_002274639.2| PREDICTED: putative leucine-rich repeat rece...   160   1e-37
ref|XP_002324522.1| predicted protein [Populus trichocarpa] gi|2...   157   7e-37
ref|XP_002878725.1| predicted protein [Arabidopsis lyrata subsp....   157   9e-37

>ref|NP_179990.1| putative leucine-rich repeat transmembrane protein kinase
            [Arabidopsis thaliana]
            gi|75339043|sp|Q9ZUI0.1|Y2241_ARATH RecName:
            Full=Putative leucine-rich repeat receptor-like
            serine/threonine-protein kinase At2g24130; Flags:
            Precursor gi|4115373|gb|AAD03374.1| putative
            receptor-like protein kinase [Arabidopsis thaliana]
            gi|330252438|gb|AEC07532.1| putative leucine-rich repeat
            transmembrane protein kinase [Arabidopsis thaliana]
          Length = 980

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/115 (67%), Positives = 99/115 (86%)
 Frame = -1

Query: 346  LVLPLMSNGSLENHLYPGQWSRPDLNLVQLVSICSDIAEGVAYLHHHAPVKVVHCDLKPS 167
            LVLPLM NGSLE HLYPG++S  +L+L+QLV+ICSD+AEG+AYLHH++PVKVVHCDLKPS
Sbjct: 733  LVLPLMPNGSLERHLYPGEYSSKNLDLIQLVNICSDVAEGIAYLHHYSPVKVVHCDLKPS 792

Query: 166  NILLDDDMTALVTDFGIAKLVKGGDDRTVDYTEVLHSYTINSTAGILCGTIGYIA 2
            NILLDD+MTALVTDFGI++LV+G ++ TV   +   S +  ST G+LCG++GYIA
Sbjct: 793  NILLDDEMTALVTDFGISRLVQGVEE-TVSTDD---SVSFGSTDGLLCGSVGYIA 843


>ref|XP_002309364.1| predicted protein [Populus trichocarpa] gi|222855340|gb|EEE92887.1|
            predicted protein [Populus trichocarpa]
          Length = 981

 Score =  160 bits (405), Expect = 1e-37
 Identities = 78/115 (67%), Positives = 93/115 (80%)
 Frame = -1

Query: 346  LVLPLMSNGSLENHLYPGQWSRPDLNLVQLVSICSDIAEGVAYLHHHAPVKVVHCDLKPS 167
            LVLPLMSNGSLE HLYP       L+L+QLVSIC+D+AEGVAYLHH++PV+VVHCDLKPS
Sbjct: 737  LVLPLMSNGSLERHLYPSHGLNTGLDLIQLVSICNDVAEGVAYLHHYSPVRVVHCDLKPS 796

Query: 166  NILLDDDMTALVTDFGIAKLVKGGDDRTVDYTEVLHSYTINSTAGILCGTIGYIA 2
            NILLD+DMTALVTDFGIA+L+KG DD          S + +ST G+LCG++GYIA
Sbjct: 797  NILLDEDMTALVTDFGIARLIKGADDS----NPTDDSVSFSSTDGLLCGSVGYIA 847


>ref|XP_002274639.2| PREDICTED: putative leucine-rich repeat receptor-like
            serine/threonine-protein kinase At2g24130-like [Vitis
            vinifera]
          Length = 975

 Score =  160 bits (404), Expect = 1e-37
 Identities = 82/115 (71%), Positives = 93/115 (80%)
 Frame = -1

Query: 346  LVLPLMSNGSLENHLYPGQWSRPDLNLVQLVSICSDIAEGVAYLHHHAPVKVVHCDLKPS 167
            LVLPLMSNG LE HLYPG+     LNLVQLVSICSD+AEGVAYLHH++PV+VVHCDLKPS
Sbjct: 738  LVLPLMSNGCLERHLYPGRDLGHGLNLVQLVSICSDVAEGVAYLHHYSPVRVVHCDLKPS 797

Query: 166  NILLDDDMTALVTDFGIAKLVKGGDDRTVDYTEVLHSYTINSTAGILCGTIGYIA 2
            NILLD+DMTALVTDFGIAKLV G +      T    S + +ST G+LCG+IGYIA
Sbjct: 798  NILLDEDMTALVTDFGIAKLVSGDEG-----TSANDSTSYSSTDGLLCGSIGYIA 847


>ref|XP_002324522.1| predicted protein [Populus trichocarpa] gi|222865956|gb|EEF03087.1|
           predicted protein [Populus trichocarpa]
          Length = 860

 Score =  157 bits (398), Expect = 7e-37
 Identities = 79/116 (68%), Positives = 94/116 (81%), Gaps = 1/116 (0%)
 Frame = -1

Query: 346 LVLPLMSNGSLENHLYPGQWSRPDLNLVQLVSICSDIAEGVAYLHHHAPVKVVHCDLKPS 167
           LVLPLMSNGSLE HLYP       L+L+QLVSIC+D+AEGVAYLHH++PV+VVHCDLKPS
Sbjct: 623 LVLPLMSNGSLEGHLYPSHGLNTGLDLIQLVSICNDVAEGVAYLHHYSPVRVVHCDLKPS 682

Query: 166 NILLDDDMTALVTDFGIAKLVKGGDD-RTVDYTEVLHSYTINSTAGILCGTIGYIA 2
           NILLD+DMTALVTDFGIA+L+KG DD  + D +  L S    S  G+LCG++GYIA
Sbjct: 683 NILLDEDMTALVTDFGIARLIKGADDSNSTDDSMFLSS----SDHGLLCGSVGYIA 734


>ref|XP_002878725.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297324564|gb|EFH54984.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 987

 Score =  157 bits (397), Expect = 9e-37
 Identities = 76/115 (66%), Positives = 97/115 (84%)
 Frame = -1

Query: 346  LVLPLMSNGSLENHLYPGQWSRPDLNLVQLVSICSDIAEGVAYLHHHAPVKVVHCDLKPS 167
            LVLPLM NGSLE HLYPG++   +L+L+QLV ICSD+AEG+AYLHH++PVKV+HCDLKPS
Sbjct: 740  LVLPLMPNGSLERHLYPGEYLSKNLDLIQLVYICSDVAEGIAYLHHYSPVKVIHCDLKPS 799

Query: 166  NILLDDDMTALVTDFGIAKLVKGGDDRTVDYTEVLHSYTINSTAGILCGTIGYIA 2
            NILLDD+MTALVTDFGI++LV+G ++ TV   +   S +  ST G+LCG++GYIA
Sbjct: 800  NILLDDEMTALVTDFGISRLVQGVEE-TVSTDD---SVSFGSTDGLLCGSVGYIA 850


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