BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040752
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]       57   2e-06
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]    55   5e-06
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]    55   5e-06
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...    55   5e-06

>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
          Length = 1157

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/72 (47%), Positives = 42/72 (58%)
 Frame = -1

Query: 217 SPLLRLENVLFIPTFQFNLIYVSELVKSQTISVVFTNDCCVFQDQLWKRRIGLGWLHEGL 38
           S  L L NVL+ PTF  NLI VS++ KS +  V F+ D C+ Q+   KR IGLG    GL
Sbjct: 437 SSSLYLTNVLYCPTFNLNLISVSKMCKSLSCFVNFSTDSCIIQELSTKRMIGLGENIHGL 496

Query: 37  YNF*LASVCSFQ 2
           Y   + S  SFQ
Sbjct: 497 YRL-VVSADSFQ 507


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/61 (44%), Positives = 40/61 (65%)
 Frame = -1

Query: 217 SPLLRLENVLFIPTFQFNLIYVSELVKSQTISVVFTNDCCVFQDQLWKRRIGLGWLHEGL 38
           +P ++L++VL +P FQ NL+ VS+L ++    V+F  D CV QD   ++ IGLG  H GL
Sbjct: 458 TPHIKLDDVLKVPQFQVNLLSVSKLTRALQCIVMFFFDFCVVQDATTRKTIGLGKQHNGL 517

Query: 37  Y 35
           Y
Sbjct: 518 Y 518


>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
          Length = 1039

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/61 (42%), Positives = 40/61 (65%)
 Frame = -1

Query: 217 SPLLRLENVLFIPTFQFNLIYVSELVKSQTISVVFTNDCCVFQDQLWKRRIGLGWLHEGL 38
           +P ++L++VL +P FQ NL+ VS+L ++    V+F +D CV QD   ++  GLG  H GL
Sbjct: 50  TPHIKLDDVLKVPQFQVNLLSVSKLTRALQCIVMFXSDFCVVQDATTRKTXGLGKQHNGL 109

Query: 37  Y 35
           Y
Sbjct: 110 Y 110


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/65 (43%), Positives = 39/65 (60%)
 Frame = -1

Query: 208 LRLENVLFIPTFQFNLIYVSELVKSQTISVVFTNDCCVFQDQLWKRRIGLGWLHEGLYNF 29
           L L+NVL+IP F+ NL+ VS+  K     + F  DCCV QD + +++IG G    GLY  
Sbjct: 496 LTLKNVLYIPEFRLNLLSVSQQTKDMKCKIYFDEDCCVIQDPIKEQKIGRGNQIGGLYVL 555

Query: 28  *LASV 14
             +SV
Sbjct: 556 DTSSV 560