BLASTX nr result

ID: Coptis25_contig00040740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040740
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264688.1| PREDICTED: protein BEARSKIN1 [Vitis vinifera]     100   2e-19
ref|XP_002329178.1| NAC domain protein, IPR003441 [Populus trich...    99   3e-19
emb|CAN70403.1| hypothetical protein VITISV_038241 [Vitis vinifera]    99   3e-19
ref|XP_003533525.1| PREDICTED: protein BEARSKIN1-like [Glycine max]    92   4e-17
ref|XP_003540565.1| PREDICTED: protein BEARSKIN1-like [Glycine max]    90   2e-16

>ref|XP_002264688.1| PREDICTED: protein BEARSKIN1 [Vitis vinifera]
          Length = 359

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 65/132 (49%), Positives = 78/132 (59%), Gaps = 18/132 (13%)
 Frame = -2

Query: 357 NKPIGYD------------PQLLSNQRDNCDSGSESLVAGGQVQYQPCEQGAGID----- 229
           +KPI YD             QL+SN RD   +GSESL      +YQPCE G  ++     
Sbjct: 237 HKPIAYDFSPLPSDSPVMIKQLMSNPRDCESAGSESL------RYQPCEPGMEVNTCEPG 290

Query: 228 -NESQQMVAGERDVGLNDWTMLDRLVTPHQLGAEDSSKGVVRFEDATNASSVNQINQQLS 52
            +  Q MV   R+  L++W+MLDRLVT H L  EDSS   VRFED  N SSV Q+N QLS
Sbjct: 291 AHHHQHMVGPGREESLSEWSMLDRLVTSH-LSHEDSSSKGVRFEDG-NGSSVQQMN-QLS 347

Query: 51  IRGEMDFWGYAK 16
           +RGEMDFWGY K
Sbjct: 348 LRGEMDFWGYGK 359


>ref|XP_002329178.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222870959|gb|EEF08090.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 368

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 68/131 (51%), Positives = 80/131 (61%), Gaps = 17/131 (12%)
 Frame = -2

Query: 357 NKPIGYD-------------PQLLSNQRDNCDSGSESLVAGGQVQYQPCEQGAGIDN--E 223
           NK +GYD              QL+S  RD C+SGSESL      +Y  CE G  +     
Sbjct: 248 NKSLGYDHYSGLPKEPPVMVKQLMSGARD-CESGSESL------RYHACEPGLEVCTCEA 300

Query: 222 SQQMVAGERD-VGLNDWTMLDRLVTPHQLGAEDSSKGVVRFEDATNASSVNQINQQLSIR 46
            QQMVAG  D  GLN+W MLDR+VT H LG EDS+KG VRF+DA+NA S + IN QL +R
Sbjct: 301 PQQMVAGREDHQGLNEWAMLDRIVTSH-LGNEDSAKG-VRFDDASNAPSAHAIN-QLPLR 357

Query: 45  GE-MDFWGYAK 16
           GE MDFWGY K
Sbjct: 358 GEMMDFWGYGK 368


>emb|CAN70403.1| hypothetical protein VITISV_038241 [Vitis vinifera]
          Length = 359

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 65/132 (49%), Positives = 78/132 (59%), Gaps = 18/132 (13%)
 Frame = -2

Query: 357 NKPIGYD------------PQLLSNQRDNCDSGSESLVAGGQVQYQPCEQGAGID----- 229
           +KPI YD             QL+SN RD   +GSESL      +YQPCE G  ++     
Sbjct: 237 HKPIXYDFSPLPSDSPVMIKQLMSNPRDCESAGSESL------RYQPCEPGMEVNTCEPG 290

Query: 228 -NESQQMVAGERDVGLNDWTMLDRLVTPHQLGAEDSSKGVVRFEDATNASSVNQINQQLS 52
            +  Q MV   R+  L++W+MLDRLVT H L  EDSS   VRFED  N SSV Q+N QLS
Sbjct: 291 AHHHQHMVGPGREESLSEWSMLDRLVTSH-LSHEDSSSKGVRFEDG-NGSSVQQMN-QLS 347

Query: 51  IRGEMDFWGYAK 16
           +RGEMDFWGY K
Sbjct: 348 LRGEMDFWGYGK 359


>ref|XP_003533525.1| PREDICTED: protein BEARSKIN1-like [Glycine max]
          Length = 359

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
 Frame = -2

Query: 333 QLLSNQRDNCDSGSESLVAGGQVQYQPCEQGAGIDN-ESQQMVAGERDVGLNDWTMLDRL 157
           QL++N RD C+SGS+ L      +YQ  E G  + + E  Q +   R  G+N+W +LDRL
Sbjct: 262 QLMTNPRD-CESGSDGL------RYQVSESGMEVGSCEPNQEMGTGRGEGINEWGVLDRL 314

Query: 156 VTPHQLGAEDSSKGVVRFEDATNASSVNQINQQLSIRGEMDFWGYAK 16
           VT H  G EDSSKG VRFE+A N  SV+QIN QLS+RGEMDFW Y K
Sbjct: 315 VTSHLAGNEDSSKG-VRFEEA-NPQSVHQIN-QLSLRGEMDFWAYGK 358


>ref|XP_003540565.1| PREDICTED: protein BEARSKIN1-like [Glycine max]
          Length = 356

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 58/107 (54%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
 Frame = -2

Query: 333 QLLSNQRDNCDSGSESLVAGGQVQYQPCEQGAGIDN-ESQQMVAGERDVGLNDWTMLDRL 157
           QL++N RD C+SGS+ L      +YQ  E G  + + E  Q +   R  G+N+W +LDRL
Sbjct: 260 QLMTNPRD-CESGSDGL------RYQVSESGMEVGSCEPNQEMGTGRGEGINEWGVLDRL 312

Query: 156 VTPHQLGAEDSSKGVVRFEDATNASSVNQINQQLSIRGEMDFWGYAK 16
           VT H LG EDSSKGV RFE+A N  SV+QINQ LS+RGEMDFW Y K
Sbjct: 313 VTSH-LGNEDSSKGV-RFEEA-NPPSVHQINQ-LSLRGEMDFWAYGK 355


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