BLASTX nr result

ID: Coptis25_contig00040724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040724
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD59592.1| MDR-like ABC transporter [Oryza sativa Japonica ...    93   5e-20
ref|XP_003579986.1| PREDICTED: ABC transporter B family member 1...    94   1e-19
ref|XP_002325260.1| multidrug/pheromone exporter, MDR family, AB...   100   2e-19
gb|AFW58616.1| hypothetical protein ZEAMMB73_341308 [Zea mays]         92   3e-19
ref|XP_002275969.2| PREDICTED: putative multidrug resistance pro...    97   1e-18

>emb|CAD59592.1| MDR-like ABC transporter [Oryza sativa Japonica Group]
          Length = 1279

 Score = 93.2 bits (230), Expect(2) = 5e-20
 Identities = 47/59 (79%), Positives = 55/59 (93%)
 Frame = -2

Query: 183 GTKAKISIARALLRDPRILLLDEATSALDPQSEKGVQDALDQASVGRTTIIVSHRLSTL 7
           G K +I+IARAL+RDPRILLLDEATSALD +SE+ VQDALD+ASVGRTT+IV+HRLSTL
Sbjct: 514 GQKQRIAIARALVRDPRILLLDEATSALDAESERTVQDALDRASVGRTTVIVAHRLSTL 572



 Score = 29.3 bits (64), Expect(2) = 5e-20
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 247 TFQILLFLVLQVGHLGTQMSGGHKSK 170
           ++ +  F  +QVG  GTQ+SGG K +
Sbjct: 493 SYGVFFFSPVQVGQFGTQLSGGQKQR 518



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/59 (61%), Positives = 49/59 (83%)
 Frame = -2

Query: 183  GTKAKISIARALLRDPRILLLDEATSALDPQSEKGVQDALDQASVGRTTIIVSHRLSTL 7
            G + +I++ARA+L+D RILLLDEATSALD  SE+ VQDA+D+   GRT ++V+HRLST+
Sbjct: 1172 GQRQRIALARAVLKDARILLLDEATSALDAASERLVQDAVDRMLRGRTCVVVAHRLSTV 1230


>ref|XP_003579986.1| PREDICTED: ABC transporter B family member 15-like [Brachypodium
           distachyon]
          Length = 1254

 Score = 93.6 bits (231), Expect(2) = 1e-19
 Identities = 47/59 (79%), Positives = 55/59 (93%)
 Frame = -2

Query: 183 GTKAKISIARALLRDPRILLLDEATSALDPQSEKGVQDALDQASVGRTTIIVSHRLSTL 7
           G K +I+IARAL+RDP+ILLLDEATSALD QSE+ VQDALD+ASVGRTT+IV+HRLSTL
Sbjct: 479 GQKQRIAIARALIRDPKILLLDEATSALDSQSERTVQDALDRASVGRTTVIVAHRLSTL 537



 Score = 27.3 bits (59), Expect(2) = 1e-19
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -1

Query: 217 QVGHLGTQMSGGHKSK 170
           QVG  GTQMSGG K +
Sbjct: 468 QVGQFGTQMSGGQKQR 483



 Score = 66.6 bits (161), Expect(2) = 5e-10
 Identities = 35/60 (58%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
 Frame = -2

Query: 183  GTKAKISIARALLRDPRILLLDEATSALDPQSEKGVQDALDQASVG-RTTIIVSHRLSTL 7
            G + +I++ARA+L++ RILLLDEATSALD  SE+ VQDA+D+   G RT ++V+HRLST+
Sbjct: 1146 GQRQRIALARAVLKNARILLLDEATSALDTVSERLVQDAVDRMLQGKRTCVVVAHRLSTV 1205



 Score = 21.9 bits (45), Expect(2) = 5e-10
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 214  VGHLGTQMSGGHKSK 170
            +G  GTQ+SGG + +
Sbjct: 1136 IGERGTQLSGGQRQR 1150


>ref|XP_002325260.1| multidrug/pheromone exporter, MDR family, ABC transporter family
           [Populus trichocarpa] gi|222866694|gb|EEF03825.1|
           multidrug/pheromone exporter, MDR family, ABC
           transporter family [Populus trichocarpa]
          Length = 1221

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 51/62 (82%), Positives = 57/62 (91%)
 Frame = -2

Query: 186 EGTKAKISIARALLRDPRILLLDEATSALDPQSEKGVQDALDQASVGRTTIIVSHRLSTL 7
           EG K +ISIARALLRDP+ILLLDEATSALD QSEK VQDAL+QAS+GRTTII++HRLSTL
Sbjct: 484 EGQKQRISIARALLRDPKILLLDEATSALDSQSEKAVQDALNQASIGRTTIIIAHRLSTL 543

Query: 6   CN 1
            N
Sbjct: 544 RN 545



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/59 (61%), Positives = 48/59 (81%)
 Frame = -2

Query: 183  GTKAKISIARALLRDPRILLLDEATSALDPQSEKGVQDALDQASVGRTTIIVSHRLSTL 7
            G K +I++ARA+L++P ILLLDEATSALD  SEK VQDAL++    RT ++V+HRLST+
Sbjct: 1121 GQKQRIALARAILKNPAILLLDEATSALDVNSEKLVQDALERTMSSRTCLVVAHRLSTI 1179


>gb|AFW58616.1| hypothetical protein ZEAMMB73_341308 [Zea mays]
          Length = 1303

 Score = 91.7 bits (226), Expect(2) = 3e-19
 Identities = 44/59 (74%), Positives = 55/59 (93%)
 Frame = -2

Query: 183 GTKAKISIARALLRDPRILLLDEATSALDPQSEKGVQDALDQASVGRTTIIVSHRLSTL 7
           G K +I+IARAL+RDP+ILLLDEATSALD +SE+ VQDALD+ASVGRTT++V+HRLST+
Sbjct: 535 GQKQRIAIARALIRDPKILLLDEATSALDSESERAVQDALDRASVGRTTVVVAHRLSTV 593



 Score = 28.1 bits (61), Expect(2) = 3e-19
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -1

Query: 226 LVLQVGHLGTQMSGGHKSK 170
           L LQVG  GTQ+SGG K +
Sbjct: 521 LHLQVGQFGTQLSGGQKQR 539



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/59 (59%), Positives = 49/59 (83%)
 Frame = -2

Query: 183  GTKAKISIARALLRDPRILLLDEATSALDPQSEKGVQDALDQASVGRTTIIVSHRLSTL 7
            G K +I++ARA+L++ R+LLLDEATSALD  SE+ VQDA+D+   GRT ++V+HRLST+
Sbjct: 1195 GQKQRIALARAILKNARVLLLDEATSALDTVSERLVQDAIDRMLQGRTCVVVAHRLSTV 1253


>ref|XP_002275969.2| PREDICTED: putative multidrug resistance protein-like [Vitis
           vinifera]
          Length = 1283

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 51/66 (77%), Positives = 57/66 (86%)
 Frame = -2

Query: 198 LKCPEGTKAKISIARALLRDPRILLLDEATSALDPQSEKGVQDALDQASVGRTTIIVSHR 19
           ++  EG K +ISIARALLRDPRILLLDEATSALD QSEK VQDA +QAS+GRTTIIV+HR
Sbjct: 521 IQMSEGQKQRISIARALLRDPRILLLDEATSALDSQSEKAVQDAFNQASLGRTTIIVAHR 580

Query: 18  LSTLCN 1
           LS L N
Sbjct: 581 LSALRN 586



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/59 (59%), Positives = 49/59 (83%)
 Frame = -2

Query: 183  GTKAKISIARALLRDPRILLLDEATSALDPQSEKGVQDALDQASVGRTTIIVSHRLSTL 7
            G K ++++ARA+L++P ILLLDEATSALD + E  VQDAL++  VGRT ++V+HRLST+
Sbjct: 1163 GQKQRLALARAILKNPAILLLDEATSALDVKLESLVQDALEKTMVGRTCLVVAHRLSTI 1221


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