BLASTX nr result

ID: Coptis25_contig00040722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040722
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27911.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_002279617.1| PREDICTED: uncharacterized protein LOC100266...    88   6e-16
ref|XP_002514110.1| conserved hypothetical protein [Ricinus comm...    69   4e-10
ref|XP_002437836.1| hypothetical protein SORBIDRAFT_10g003430 [S...    67   1e-09
gb|AFW85858.1| hypothetical protein ZEAMMB73_026841 [Zea mays]         64   1e-08

>emb|CBI27911.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
 Frame = +1

Query: 43  INYRSTWAQLIAFPEWFFFAAILLFSKNGCQFAFWSRCITSAVTTEHTCDAEQCC--TAA 216
           I ++S WA  + FP+WFFFA++LLFS+   Q  F+S+C      TE   D E  C  +AA
Sbjct: 323 IGHKSVWAAAMNFPDWFFFASVLLFSEKSFQDNFYSKCGIGVPRTEKRHDVEPLCFSSAA 382

Query: 217 ARYLAYIISPMSEIHHDLLVKNLIQISESW 306
           ARY+A+I+SP  + H DLLV  L ++SESW
Sbjct: 383 ARYIAWILSPADKSHQDLLVDWLTKLSESW 412


>ref|XP_002279617.1| PREDICTED: uncharacterized protein LOC100266211 [Vitis vinifera]
          Length = 698

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
 Frame = +1

Query: 43  INYRSTWAQLIAFPEWFFFAAILLFSKNGCQFAFWSRCITSAVTTEHTCDAEQCC--TAA 216
           I ++S WA  + FP+WFFFA++LLFS+   Q  F+S+C      TE   D E  C  +AA
Sbjct: 359 IGHKSVWAAAMNFPDWFFFASVLLFSEKSFQDNFYSKCGIGVPRTEKRHDVEPLCFSSAA 418

Query: 217 ARYLAYIISPMSEIHHDLLVKNLIQISESW 306
           ARY+A+I+SP  + H DLLV  L ++SESW
Sbjct: 419 ARYIAWILSPADKSHQDLLVDWLTKLSESW 448


>ref|XP_002514110.1| conserved hypothetical protein [Ricinus communis]
           gi|223546566|gb|EEF48064.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 694

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
 Frame = +1

Query: 52  RSTWAQLIAFPEWFFFAAILLFSKNGCQFAFWSRCITSAVTTEHTCDAEQC--CTAAARY 225
           +S WA  I FP+WF+FA++LLFS N  Q +  S+ I     +  T + EQ     AAARY
Sbjct: 359 KSIWALAICFPDWFYFASVLLFSTNCFQKSHQSKRIFGVPKSGKTNNKEQSPPAAAAARY 418

Query: 226 LAYIISPMSEIHHDLLVKNLIQISESWIKR 315
           +A+I+SP ++   D L   L +ISE W  R
Sbjct: 419 IAWILSPNNQSQQDWLFGGLTKISEFWTLR 448


>ref|XP_002437836.1| hypothetical protein SORBIDRAFT_10g003430 [Sorghum bicolor]
           gi|241916059|gb|EER89203.1| hypothetical protein
           SORBIDRAFT_10g003430 [Sorghum bicolor]
          Length = 664

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
 Frame = +1

Query: 34  KKLINYRSTWAQLIAFPEWFFFAAILLFSKNGCQFAFWSRCITSAVTTEHTCDAEQCCTA 213
           K L+NY S W  +I FP WF FA  LLF + G Q  + S  ++  +T E   D       
Sbjct: 336 KGLVNYNSAWCMIINFPVWFSFATALLFYREGSQ-DYLSETLSKEITVESISDV-SLVQR 393

Query: 214 AARYLAYIISPMSEIHHDLLVKNLIQISESWI---KRC 318
           AA YL++++ P ++   ++L  N+++IS SW    KRC
Sbjct: 394 AAFYLSWVLCPSNDDQCEVLSNNILEISRSWARNNKRC 431


>gb|AFW85858.1| hypothetical protein ZEAMMB73_026841 [Zea mays]
          Length = 663

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
 Frame = +1

Query: 34  KKLINYRSTWAQLIAFPEWFFFAAILLFSKNGCQFAFWSRCITSAVTTEHTCDAEQCCTA 213
           K L+ Y S W  +I+FP WF +A  LLF + G Q  + S  ++  +T E   D       
Sbjct: 335 KGLVKYNSAWYMIISFPIWFSYATALLFHREGSQ-DYLSETLSKEITAESISDV-SLVQR 392

Query: 214 AARYLAYIISPMSEIHHDLLVKNLIQISESWI---KRCSS 324
           AA YL++++ P +    ++L  N+++IS SW    K+C S
Sbjct: 393 AAFYLSWLLCPYNHDQREMLSNNILEISHSWARNNKKCVS 432


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