BLASTX nr result

ID: Coptis25_contig00040696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040696
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302897.1| predicted protein [Populus trichocarpa] gi|2...   155   4e-36
emb|CBI39437.3| unnamed protein product [Vitis vinifera]              152   3e-35
ref|XP_002265776.1| PREDICTED: fanconi-associated nuclease 1 hom...   152   3e-35
ref|XP_003551811.1| PREDICTED: fanconi-associated nuclease 1 hom...   141   6e-32
ref|XP_003621733.1| Coiled-coil domain-containing protein MTMR15...   138   5e-31

>ref|XP_002302897.1| predicted protein [Populus trichocarpa] gi|222844623|gb|EEE82170.1|
           predicted protein [Populus trichocarpa]
          Length = 1028

 Score =  155 bits (391), Expect = 4e-36
 Identities = 72/117 (61%), Positives = 97/117 (82%), Gaps = 1/117 (0%)
 Frame = -1

Query: 352 KSFPPSMTKYQQNFCLLLHEAMTNHLHLFTDDEKVFIESFKALSDDSQRLFVRLYTRKGP 173
           K++PPSMTKYQQNF +L+ E + ++ HLFT+DEK+F+ESF +LSDDSQRLFVRLYTRKGP
Sbjct: 396 KNYPPSMTKYQQNFWVLIQEVLKSNPHLFTNDEKMFLESFISLSDDSQRLFVRLYTRKGP 455

Query: 172 WFRMSNVVYPEIVDYHQAIEGLCGAGYMCSLESM-KLNDYDLKEVLDVLDVSEIREI 5
           WFRMSN+ YPE+ D  QAI+ L   GYMCS + + +L + D++++L++L VSE+REI
Sbjct: 456 WFRMSNISYPEVTDSQQAIKDLSAMGYMCSFKGVDELQENDMEKILNLLTVSELREI 512


>emb|CBI39437.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  152 bits (384), Expect = 3e-35
 Identities = 71/118 (60%), Positives = 94/118 (79%), Gaps = 2/118 (1%)
 Frame = -1

Query: 352 KSFPPSMTKYQQNFCLLLHEAMTNHLHLFTDDEKVFIESFKALSDDSQRLFVRLYTRKGP 173
           K+ PPS+ KYQ+NFC L+ E + ++ HLFTDDEK+F+ SF +LSDD QR+FVRLYTRKGP
Sbjct: 338 KTCPPSIAKYQRNFCFLIQEVLASNPHLFTDDEKIFLGSFTSLSDDCQRIFVRLYTRKGP 397

Query: 172 WFRMSNVVYPEIVDYHQAIEGLCGAGYMCSLESM--KLNDYDLKEVLDVLDVSEIREI 5
           WFRM N+ YPE++D  QA+ GL  AGY+CS +SM    ++ D+KEVL++L VSE+REI
Sbjct: 398 WFRMCNISYPEVLDSKQAVRGLSDAGYICSSQSMIEPHDNGDMKEVLNLLTVSELREI 455


>ref|XP_002265776.1| PREDICTED: fanconi-associated nuclease 1 homolog [Vitis vinifera]
          Length = 955

 Score =  152 bits (384), Expect = 3e-35
 Identities = 71/118 (60%), Positives = 94/118 (79%), Gaps = 2/118 (1%)
 Frame = -1

Query: 352 KSFPPSMTKYQQNFCLLLHEAMTNHLHLFTDDEKVFIESFKALSDDSQRLFVRLYTRKGP 173
           K+ PPS+ KYQ+NFC L+ E + ++ HLFTDDEK+F+ SF +LSDD QR+FVRLYTRKGP
Sbjct: 341 KTCPPSIAKYQRNFCFLIQEVLASNPHLFTDDEKIFLGSFTSLSDDCQRIFVRLYTRKGP 400

Query: 172 WFRMSNVVYPEIVDYHQAIEGLCGAGYMCSLESM--KLNDYDLKEVLDVLDVSEIREI 5
           WFRM N+ YPE++D  QA+ GL  AGY+CS +SM    ++ D+KEVL++L VSE+REI
Sbjct: 401 WFRMCNISYPEVLDSKQAVRGLSDAGYICSSQSMIEPHDNGDMKEVLNLLTVSELREI 458


>ref|XP_003551811.1| PREDICTED: fanconi-associated nuclease 1 homolog [Glycine max]
          Length = 981

 Score =  141 bits (355), Expect = 6e-32
 Identities = 67/114 (58%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
 Frame = -1

Query: 343 PPSMTKYQQNFCLLLHEAMTNHLHLFTDDEKVFIESFKALSDDSQRLFVRLYTRKGPWFR 164
           PPS  KYQ NF L+LHE + N++HL T+DEK ++ESF  LS+DSQRLF+RLYTRKGPWFR
Sbjct: 374 PPSSVKYQLNFGLMLHEVLRNNIHLLTEDEKTYMESFTLLSNDSQRLFIRLYTRKGPWFR 433

Query: 163 MSNVVYPEIVDYHQAIEGLCGAGYMCSLE-SMKLNDYDLKEVLDVLDVSEIREI 5
           MSN+ YPEIVD  +A++GL    Y+ S+E + KL + DL ++L++L V E+REI
Sbjct: 434 MSNISYPEIVDTQKAVKGLAEKEYIHSIEDANKLCESDLNDILNILSVCELREI 487


>ref|XP_003621733.1| Coiled-coil domain-containing protein MTMR15 [Medicago truncatula]
           gi|355496748|gb|AES77951.1| Coiled-coil
           domain-containing protein MTMR15 [Medicago truncatula]
          Length = 922

 Score =  138 bits (347), Expect = 5e-31
 Identities = 65/113 (57%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
 Frame = -1

Query: 340 PSMTKYQQNFCLLLHEAMTNHLHLFTDDEKVFIESFKALSDDSQRLFVRLYTRKGPWFRM 161
           PS  KYQ NFCL+L E + N++HL T+DEK + ESF + S+DSQRLF+RLYTRKGPWFRM
Sbjct: 306 PSSVKYQMNFCLMLQEVLRNNIHLLTEDEKTYTESFTSFSNDSQRLFLRLYTRKGPWFRM 365

Query: 160 SNVVYPEIVDYHQAIEGLCGAGYMCSLE-SMKLNDYDLKEVLDVLDVSEIREI 5
           S++ YPEI D  +A++ L    Y+CSLE   +L + D+ ++LDVL VSE+REI
Sbjct: 366 SSISYPEIFDAQKAVKELAEKEYICSLEDGNQLCESDMNDILDVLTVSELREI 418


Top