BLASTX nr result

ID: Coptis25_contig00040660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040660
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311679.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002281562.2| PREDICTED: uncharacterized protein LOC100251...    89   4e-16
emb|CAN80688.1| hypothetical protein VITISV_021551 [Vitis vinifera]    85   7e-15
ref|XP_002528832.1| conserved hypothetical protein [Ricinus comm...    77   1e-12
ref|XP_004147152.1| PREDICTED: uncharacterized protein LOC101205...    72   4e-11

>ref|XP_002311679.1| predicted protein [Populus trichocarpa] gi|222851499|gb|EEE89046.1|
           predicted protein [Populus trichocarpa]
          Length = 1218

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 11/146 (7%)
 Frame = -3

Query: 454 EGGKGGYEKVVNNELFIYEQTARSDFLISKSDPLA-----------GSTSLCNVPDESFI 308
           +G +G Y    N++  I+ +  +S +  S SDPLA              S  N+ D+S++
Sbjct: 546 DGRRGRYRMNANDDFVIHGRENKSGYRSSSSDPLAINGFETAKGDLDRRSSNNMDDDSYV 605

Query: 307 LPLRKSSKDHAKSDIRASNDMYAEVPFGLQKKENVLSSLRKQLSYEPDDLSIMPLCGTVR 128
           + LR +S D   ++ R   D+ +E P   QK EN+ + +  Q+ YEPDDLS+MP  GT +
Sbjct: 606 VSLRSTSLDQVVTEGRNIIDVDSEFPSTAQKTENLSNRVGSQVKYEPDDLSLMPERGTEK 665

Query: 127 ESIGYDPAFDHDMQDCARGDLTVKNK 50
            SIGYDPA D+DMQ      L  KNK
Sbjct: 666 GSIGYDPALDYDMQ----ASLHKKNK 687


>ref|XP_002281562.2| PREDICTED: uncharacterized protein LOC100251059 [Vitis vinifera]
          Length = 1292

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 54/135 (40%), Positives = 80/135 (59%), Gaps = 10/135 (7%)
 Frame = -3

Query: 460 ESEGGKGGYEKVVNNELFIYEQTARSDFLISKSDPLA-----GSTSLC-----NVPDESF 311
           E +G +  Y +  N+   I+ Q  +  F  S +DPLA     G+T        N+ DES+
Sbjct: 586 EIDGRRVRYRRTSNDAFMIHGQENQLHFTTS-TDPLAINGFEGTTGNLDRISNNMADESY 644

Query: 310 ILPLRKSSKDHAKSDIRASNDMYAEVPFGLQKKENVLSSLRKQLSYEPDDLSIMPLCGTV 131
           I+PLR  S DH ++D R + DM +E+P  LQ  EN  + + +Q+ YEPDDL++MP  GT 
Sbjct: 645 IVPLR--SIDHVEADDRNAIDMDSELPSALQNAENCSNRMERQIDYEPDDLTLMPERGTE 702

Query: 130 RESIGYDPAFDHDMQ 86
           + S GYDPA +++MQ
Sbjct: 703 KGSTGYDPALEYEMQ 717


>emb|CAN80688.1| hypothetical protein VITISV_021551 [Vitis vinifera]
          Length = 1351

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
 Frame = -3

Query: 460  ESEGGKGGYEKVVNNELFIYEQTARSDFLISKSDPLA-----GSTSLC-----NVPDESF 311
            E +G +  Y +  N+   I+ Q  +  F  S +DPL      G+T        N+ DES+
Sbjct: 655  EIDGRRVRYRRTSNDAFMIHGQENQLHFTTS-TDPLVINGFEGTTGNLDRISNNMADESY 713

Query: 310  ILPLRKSSKDHAKSDIRASNDMYAEVPFGLQKKENVLSSLRKQLSYEPDDLSIMPLCGTV 131
            I+PLR  S D  ++D R + DM +E+P  LQ  EN  + + +Q+ YEPDDL++MP  GT 
Sbjct: 714  IVPLR--SIDQVEADDRNAIDMDSELPSALQNAENCSNRMERQIDYEPDDLTLMPERGTE 771

Query: 130  RESIGYDPAFDHDMQDCARGDLTVKNK 50
            + S GYDPA +++MQ   +   ++ N+
Sbjct: 772  KGSTGYDPALEYEMQAHGKDAASLVNR 798


>ref|XP_002528832.1| conserved hypothetical protein [Ricinus communis]
            gi|223531744|gb|EEF33566.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1280

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 13/146 (8%)
 Frame = -3

Query: 448  GKGGYEKVVNNELFIYEQTARSDFLISKSDPLA-----------GSTSLCNVPDESFILP 302
            G+ G  + +N++  ++++  +S ++ S  DPL              +S  N+ D+S+++ 
Sbjct: 602  GRRGRCRSLNDDFMVHKRENQSGYMDSPPDPLVMNGAVHANKNLNRSSSHNMDDDSYVVS 661

Query: 301  LRKSSKDHAKSDIRASNDMYAEVPFGLQKKENVLSSLRKQLSYEPDDLSIMPLCGTVRES 122
            LR +S D   +  R + DM +E P    + EN+ + L  Q  YEPDDLS+MP   + + +
Sbjct: 662  LRSTSVDQNGTVGRPAIDMDSEFPSS--QAENLSTRLASQAKYEPDDLSLMPERASEKGT 719

Query: 121  IGYDPAFDHDMQDCAR--GDLTVKNK 50
            +GYDPA D++MQ  A   G L  KNK
Sbjct: 720  VGYDPALDYEMQVLAENGGSLDKKNK 745


>ref|XP_004147152.1| PREDICTED: uncharacterized protein LOC101205835 [Cucumis sativus]
          Length = 1303

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
 Frame = -3

Query: 460  ESEGGKGGYEKVVNNELFIYEQTARSDFLISKSDPLAGS-----------TSLCNVPDES 314
            E +GG+ GY +  +++  +Y Q  ++    + SDPLA S            +  N+  +S
Sbjct: 621  ELDGGRNGYRRPGSDDFMVYGQKGQT-LSNAHSDPLAVSGLDIRKTSYDKKNSNNLDGDS 679

Query: 313  FILPLRKSSKDHAKSDIRASNDMYAEVPFGLQKKENVLSSLRKQLSYEPDDLSIMPLCGT 134
            +I+PLR  S D    D R + DM +E P    K EN+ + +    +YEPD L++MP   T
Sbjct: 680  YIVPLRSMSMDAVGKDGRTAVDMDSEFPSSNHKAENLSNRIA---TYEPDVLNLMPKRET 736

Query: 133  VRESIGYDPAFDHDMQ 86
              E  GYDPA +++MQ
Sbjct: 737  ENEPAGYDPALEYEMQ 752


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