BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040630
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC76821.1| hypothetical protein OsI_14959 [Oryza sativa Indi...    49   2e-10
emb|CCA66140.1| hypothetical protein [Beta vulgaris subsp. vulga...    68   7e-10
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   2e-09
ref|XP_002447531.1| hypothetical protein SORBIDRAFT_06g002845 [S...    47   4e-09
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...    52   7e-09

>gb|EEC76821.1| hypothetical protein OsI_14959 [Oryza sativa Indica Group]
          Length = 405

 Score = 48.9 bits (115), Expect(2) = 2e-10
 Identities = 34/103 (33%), Positives = 46/103 (44%)
 Frame = -2

Query: 351 IIERLDRAMTTDAWLLAFPRMQVTNLVNATSDHLSIMINLNKKNDNRNEHDKPFKFYNMW 172
           ++ERLDR +    W + FP   V +L    SDH  I+  LN  +   +   K FKF N W
Sbjct: 58  VLERLDRCLANVEWCMLFPHTTVYHLPMLYSDHAPIIAILNPIH---HHPKKSFKFENWW 114

Query: 171 FSDTTCMPIIDTVWNSIMHDMSNVNVVLKLKVTQQHLSI*NKK 43
            S+          W++I     N N   K     +HLS  NKK
Sbjct: 115 ISEKDFQKEAQAGWSAI-----NSNFHSKAIHLGKHLSTWNKK 152



 Score = 41.2 bits (95), Expect(2) = 2e-10
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = -3

Query: 434 INDFGLIDLGYKGPKYTWSNKR 369
           I++ GLIDLGY GP YTWSNK+
Sbjct: 31  IHNLGLIDLGYNGPAYTWSNKK 52


>emb|CCA66140.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/99 (33%), Positives = 56/99 (56%)
 Frame = -2

Query: 339 LDRAMTTDAWLLAFPRMQVTNLVNATSDHLSIMINLNKKNDNRNEHDKPFKFYNMWFSDT 160
           LDR      WL+ FP ++++ L+   SDH  ++++    N+++N   KPF+F N W SD 
Sbjct: 194 LDRLFINPEWLILFPGLKLSLLMRGLSDHCPLLVH----NEDKNWGPKPFRFQNCWLSDP 249

Query: 159 TCMPIIDTVWNSIMHDMSNVNVVLKLKVTQQHLSI*NKK 43
            C+ I+  VW +     S V+ V KLK  ++ L + N++
Sbjct: 250 NCLKIVKEVWQA----SSGVSAVGKLKAVRKRLKVWNQE 284


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 57.0 bits (136), Expect(2) = 2e-09
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = -2

Query: 363 PNGHIIERLDRAMTTDAWLLAFPRMQVTNLVNATSDHLSIMINLNKKNDNRNEHDKPFKF 184
           P+  I ERLDR +  D W   FP  +V +L    SDH  +++     ND+    +K FKF
Sbjct: 188 PSTLIRERLDRMLANDEWCDNFPSWEVVHLPRYRSDHAPLLLKTG-VNDSFRRGNKLFKF 246

Query: 183 YNMWFSDTTCMPIIDTVWN-SIMHDMSN 103
             MW S   C  I++  WN S   D++N
Sbjct: 247 EAMWLSKEECGKIVEEAWNGSAGEDITN 274



 Score = 29.6 bits (65), Expect(2) = 2e-09
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -3

Query: 440 DLINDFGLIDLGYKGPKYTWSNKRAPRMVI 351
           ++I+D  + DLGY G ++TW    +P  +I
Sbjct: 163 EVIDDCAVKDLGYVGNRFTWQRGNSPSTLI 192


>ref|XP_002447531.1| hypothetical protein SORBIDRAFT_06g002845 [Sorghum bicolor]
           gi|241938714|gb|EES11859.1| hypothetical protein
           SORBIDRAFT_06g002845 [Sorghum bicolor]
          Length = 993

 Score = 46.6 bits (109), Expect(2) = 4e-09
 Identities = 23/72 (31%), Positives = 36/72 (50%)
 Frame = -2

Query: 345 ERLDRAMTTDAWLLAFPRMQVTNLVNATSDHLSIMINLNKKNDNRNEHDKPFKFYNMWFS 166
           +RLDR +    W +A+PR  V +L    SDH  I+  L   +  R+ ++K F+F N W  
Sbjct: 225 QRLDRCLANAEWCMAYPRTTVYHLPMRRSDHAPILTML---DSTRHHNNKIFRFKNWWLM 281

Query: 165 DTTCMPIIDTVW 130
           +   M +    W
Sbjct: 282 EQDYMQVAKESW 293



 Score = 38.9 bits (89), Expect(2) = 4e-09
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -3

Query: 440 DLINDFGLIDLGYKGPKYTWSNKR 369
           D +   G +DLGY GP YTW+NKR
Sbjct: 194 DYVKQCGFLDLGYSGPAYTWTNKR 217


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score = 51.6 bits (122), Expect(2) = 7e-09
 Identities = 27/78 (34%), Positives = 38/78 (48%)
 Frame = -2

Query: 360 NGHIIERLDRAMTTDAWLLAFPRMQVTNLVNATSDHLSIMINLNKKNDNRNEHDKPFKFY 181
           N  I ++LDR +  D WL +FPR          SDHL   INLN       +  +PFKF 
Sbjct: 83  NDLIAKKLDRVLVNDVWLQSFPRSYSVFEAGGCSDHLRCRINLNVGAGAVVKGKRPFKFV 142

Query: 180 NMWFSDTTCMPIIDTVWN 127
           N+       +P +++ WN
Sbjct: 143 NVITEMEHFIPTVESYWN 160



 Score = 33.1 bits (74), Expect(2) = 7e-09
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 434 INDFGLIDLGYKGPKYTWSNKRAPRMVISLKD 339
           +N   + DL Y GP +TWSNKR   ++    D
Sbjct: 60  VNHCSITDLAYHGPLFTWSNKRENDLIAKKLD 91