BLASTX nr result

ID: Coptis25_contig00040618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040618
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516209.1| microtubule motor, putative [Ricinus communi...   117   1e-24
emb|CBI27754.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002275046.1| PREDICTED: uncharacterized protein LOC100254...   110   2e-22
dbj|BAB86284.1| kinesin-like protein NACK2 [Nicotiana tabacum]        109   3e-22
ref|XP_002326146.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22

>ref|XP_002516209.1| microtubule motor, putative [Ricinus communis]
           gi|223544695|gb|EEF46211.1| microtubule motor, putative
           [Ricinus communis]
          Length = 891

 Score =  117 bits (293), Expect = 1e-24
 Identities = 63/81 (77%), Positives = 70/81 (86%)
 Frame = -3

Query: 244 RTAIICTMSPALSHVEQSRNTLSFANSAKEVTNTAKVNMLHDQVVAEKQLVKQLQNEVAR 65
           RTAIICT+SPALSHVEQ+RNTLSFA SAKEVTN A+VNM    VVA+K LVK LQ EVAR
Sbjct: 319 RTAIICTISPALSHVEQTRNTLSFATSAKEVTNNAQVNM----VVADKSLVKHLQKEVAR 374

Query: 64  LEAEMQSPEPSSLCLKSQLIE 2
           LEAE++SPEPSS CLKS L+E
Sbjct: 375 LEAELRSPEPSSSCLKSILME 395


>emb|CBI27754.3| unnamed protein product [Vitis vinifera]
          Length = 942

 Score =  110 bits (274), Expect = 2e-22
 Identities = 59/82 (71%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
 Frame = -3

Query: 244 RTAIICTMSPALSHVEQSRNTLSFANSAKEVTNTAKVNMLHDQVVAEKQLVKQLQNEVAR 65
           RTAIICT+SP LSHVEQSRNTLSFA SAKEVTNTA++NM    VV +K+LVK LQ EVAR
Sbjct: 318 RTAIICTVSPGLSHVEQSRNTLSFATSAKEVTNTAQINM----VVPDKKLVKHLQKEVAR 373

Query: 64  LEAEMQSPEP-SSLCLKSQLIE 2
           LEAE++SPEP SS C+++ L+E
Sbjct: 374 LEAELRSPEPSSSACIRTLLME 395


>ref|XP_002275046.1| PREDICTED: uncharacterized protein LOC100254378 [Vitis vinifera]
          Length = 943

 Score =  110 bits (274), Expect = 2e-22
 Identities = 59/82 (71%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
 Frame = -3

Query: 244 RTAIICTMSPALSHVEQSRNTLSFANSAKEVTNTAKVNMLHDQVVAEKQLVKQLQNEVAR 65
           RTAIICT+SP LSHVEQSRNTLSFA SAKEVTNTA++NM    VV +K+LVK LQ EVAR
Sbjct: 319 RTAIICTVSPGLSHVEQSRNTLSFATSAKEVTNTAQINM----VVPDKKLVKHLQKEVAR 374

Query: 64  LEAEMQSPEP-SSLCLKSQLIE 2
           LEAE++SPEP SS C+++ L+E
Sbjct: 375 LEAELRSPEPSSSACIRTLLME 396


>dbj|BAB86284.1| kinesin-like protein NACK2 [Nicotiana tabacum]
          Length = 955

 Score =  109 bits (272), Expect = 3e-22
 Identities = 60/82 (73%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
 Frame = -3

Query: 244 RTAIICTMSPALSHVEQSRNTLSFANSAKEVTNTAKVNMLHDQVVAEKQLVKQLQNEVAR 65
           RTAIICT+SPALSH+EQSRNTL FA SAKEVT TA+VNM    VVAEKQL+K LQ EV+R
Sbjct: 327 RTAIICTLSPALSHLEQSRNTLCFATSAKEVTTTAQVNM----VVAEKQLLKHLQKEVSR 382

Query: 64  LEAEMQSPEP-SSLCLKSQLIE 2
           LEAE++SP+P +S CL+S LIE
Sbjct: 383 LEAELRSPDPAASPCLRSLLIE 404


>ref|XP_002326146.1| predicted protein [Populus trichocarpa] gi|222833339|gb|EEE71816.1|
           predicted protein [Populus trichocarpa]
          Length = 952

 Score =  107 bits (268), Expect = 8e-22
 Identities = 60/82 (73%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
 Frame = -3

Query: 244 RTAIICTMSPALSHVEQSRNTLSFANSAKEVTNTAKVNMLHDQVVAEKQLVKQLQNEVAR 65
           RTAIICTMSPALSHVEQ+RNTLSFA SAKEVTN A++NM    VV++K+LVK LQ EV R
Sbjct: 320 RTAIICTMSPALSHVEQTRNTLSFATSAKEVTNNAQINM----VVSDKKLVKHLQKEVER 375

Query: 64  LEAEMQSPEPSSLC-LKSQLIE 2
           LEAE++SPEPSS   L+S LIE
Sbjct: 376 LEAELRSPEPSSASYLQSLLIE 397


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