BLASTX nr result

ID: Coptis25_contig00040610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040610
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511147.1| Protein HVA22, putative [Ricinus communis] g...    77   1e-12
ref|XP_002284092.1| PREDICTED: HVA22-like protein e [Vitis vinif...    64   2e-08
ref|NP_001147407.1| LOC100281016 [Zea mays] gi|195611128|gb|ACG2...    63   3e-08
emb|CAN60642.1| hypothetical protein VITISV_039527 [Vitis vinifera]    63   3e-08
ref|NP_001237127.1| uncharacterized protein LOC100305818 [Glycin...    60   2e-07

>ref|XP_002511147.1| Protein HVA22, putative [Ricinus communis]
           gi|223550262|gb|EEF51749.1| Protein HVA22, putative
           [Ricinus communis]
          Length = 114

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 9/69 (13%)
 Frame = +2

Query: 2   IKLALVAWLVLPQFRGAAFIYERFVRKKLRQYGGKYVKDQSP---------TGKNKLMDF 154
           +KL LVAWLVLPQFRGAAFIYE++VR+ L++Y G   +  SP          GKNK + F
Sbjct: 44  VKLVLVAWLVLPQFRGAAFIYEKYVRENLKKYRGGRDRHHSPHTSPNVSSGKGKNKFVQF 103

Query: 155 ISVKKGEHE 181
           I+ KKGEHE
Sbjct: 104 ITPKKGEHE 112


>ref|XP_002284092.1| PREDICTED: HVA22-like protein e [Vitis vinifera]
           gi|297734449|emb|CBI15696.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 7/67 (10%)
 Frame = +2

Query: 2   IKLALVAWLVLPQFRGAAFIYERFVRKKLRQYG--GKYVKDQSPT-----GKNKLMDFIS 160
           +KL  VAWLVLPQFRGAAFIYE+FVR+++ ++G  G+     S +     G +K + F+ 
Sbjct: 73  VKLVFVAWLVLPQFRGAAFIYEKFVREQIWKHGRAGRAENRASTSHHHGKGDSKSVQFVG 132

Query: 161 VKKGEHE 181
           +KKG HE
Sbjct: 133 LKKGPHE 139


>ref|NP_001147407.1| LOC100281016 [Zea mays] gi|195611128|gb|ACG27394.1| HVA22-like
           protein e [Zea mays] gi|195621378|gb|ACG32519.1|
           HVA22-like protein e [Zea mays]
           gi|414591421|tpg|DAA41992.1| TPA: HVA22-like protein e
           [Zea mays]
          Length = 142

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 9/69 (13%)
 Frame = +2

Query: 2   IKLALVAWLVLPQFRGAAFIYERFVRKKLRQYG---GKYVKDQSPTG------KNKLMDF 154
           +KL  +AWLVLP FRGAAFIY++FVR++LR++G      VK  SP+       KNK + F
Sbjct: 73  LKLLFIAWLVLPNFRGAAFIYDKFVREQLRKHGLTAAGSVKSSSPSSKDKDKPKNKFLAF 132

Query: 155 ISVKKGEHE 181
           ++ KK +HE
Sbjct: 133 VTPKK-DHE 140


>emb|CAN60642.1| hypothetical protein VITISV_039527 [Vitis vinifera]
          Length = 112

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/67 (49%), Positives = 45/67 (67%), Gaps = 7/67 (10%)
 Frame = +2

Query: 2   IKLALVAWLVLPQFRGAAFIYERFVRKKLRQYG--GKYVKDQSPT-----GKNKLMDFIS 160
           +KL  VAWLVLPQFRGAAFIYE+FVR+++ ++G  G+     S +     G  K + F+ 
Sbjct: 44  VKLVFVAWLVLPQFRGAAFIYEKFVREQIWKHGRAGRAENRASTSHHHGKGDXKSVQFVG 103

Query: 161 VKKGEHE 181
           +KKG HE
Sbjct: 104 LKKGAHE 110


>ref|NP_001237127.1| uncharacterized protein LOC100305818 [Glycine max]
           gi|255626697|gb|ACU13693.1| unknown [Glycine max]
          Length = 146

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 12/72 (16%)
 Frame = +2

Query: 2   IKLALVAWLVLPQFRGAAFIYERFVRKKLRQYGGK----YVKDQSPTGKN--------KL 145
           +KL  VAWLVLPQF GAA++YERFVR+ +R+Y  +    YV  Q  + K+        K 
Sbjct: 73  VKLLTVAWLVLPQFAGAAYLYERFVREHIRKYITEKEYPYVNHQQQSKKSPNNGGKAKKF 132

Query: 146 MDFISVKKGEHE 181
           ++F++ KKG+ E
Sbjct: 133 VEFVTPKKGDQE 144


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