BLASTX nr result

ID: Coptis25_contig00040608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040608
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522369.1| conserved hypothetical protein [Ricinus comm...   140   8e-32
ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
emb|CBI32505.3| unnamed protein product [Vitis vinifera]              135   4e-30
ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein ...   135   4e-30
ref|XP_004159134.1| PREDICTED: uncharacterized membrane protein ...   123   1e-26

>ref|XP_002522369.1| conserved hypothetical protein [Ricinus communis]
           gi|223538447|gb|EEF40053.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 550

 Score =  140 bits (354), Expect = 8e-32
 Identities = 60/86 (69%), Positives = 76/86 (88%)
 Frame = +3

Query: 3   AVLGVVLDIPLITLIVIYKAPIMLFKGWHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPF 182
           A L +++D+P+IT+IV+YKAPI+LFKGWHRL++DL+GR+GPF ETVC+PFAG  I+LWP 
Sbjct: 190 ACLAILVDVPVITIIVVYKAPILLFKGWHRLIQDLIGRAGPFFETVCIPFAGFWILLWPI 249

Query: 183 AVVLAVLVGIMSSLGFGCYAAVVAYQ 260
            V+LA L GI+SS GFGCYAAVVAYQ
Sbjct: 250 VVLLATLAGIVSSFGFGCYAAVVAYQ 275


>ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|222853077|gb|EEE90624.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  136 bits (343), Expect = 2e-30
 Identities = 60/86 (69%), Positives = 76/86 (88%)
 Frame = +3

Query: 3   AVLGVVLDIPLITLIVIYKAPIMLFKGWHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPF 182
           A+LG+V+D+ +IT+IV+ KAP+ML KGWHRL++DL+GR GPFLETVCVPFA L I+LWP 
Sbjct: 189 AILGIVVDVHVITMIVLLKAPLMLLKGWHRLIQDLIGREGPFLETVCVPFASLWILLWPI 248

Query: 183 AVVLAVLVGIMSSLGFGCYAAVVAYQ 260
            V+LA+  GI+SSLGFGC+AAVVAYQ
Sbjct: 249 MVLLAIAAGIISSLGFGCFAAVVAYQ 274


>emb|CBI32505.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score =  135 bits (339), Expect = 4e-30
 Identities = 59/86 (68%), Positives = 75/86 (87%)
 Frame = +3

Query: 3   AVLGVVLDIPLITLIVIYKAPIMLFKGWHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPF 182
           A+LGV++D+P ITLIV+YK+PI+LFKGW++L+ DL+GR GPF ET+CVPFAGLLI+LWP 
Sbjct: 190 AILGVLVDVPFITLIVLYKSPILLFKGWNQLLHDLIGREGPFFETICVPFAGLLILLWPI 249

Query: 183 AVVLAVLVGIMSSLGFGCYAAVVAYQ 260
            VVLA L G++SS  FGC AAV+AYQ
Sbjct: 250 VVVLAALAGVISSFFFGCCAAVIAYQ 275


>ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Vitis
           vinifera]
          Length = 547

 Score =  135 bits (339), Expect = 4e-30
 Identities = 59/86 (68%), Positives = 75/86 (87%)
 Frame = +3

Query: 3   AVLGVVLDIPLITLIVIYKAPIMLFKGWHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPF 182
           A+LGV++D+P ITLIV+YK+PI+LFKGW++L+ DL+GR GPF ET+CVPFAGLLI+LWP 
Sbjct: 190 AILGVLVDVPFITLIVLYKSPILLFKGWNQLLHDLIGREGPFFETICVPFAGLLILLWPI 249

Query: 183 AVVLAVLVGIMSSLGFGCYAAVVAYQ 260
            VVLA L G++SS  FGC AAV+AYQ
Sbjct: 250 VVVLAALAGVISSFFFGCCAAVIAYQ 275


>ref|XP_004159134.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Cucumis
           sativus]
          Length = 589

 Score =  123 bits (309), Expect = 1e-26
 Identities = 56/85 (65%), Positives = 70/85 (82%)
 Frame = +3

Query: 6   VLGVVLDIPLITLIVIYKAPIMLFKGWHRLVEDLVGRSGPFLETVCVPFAGLLIVLWPFA 185
           +LG+V+D+ +I+ I I+K+PIMLFKGWHRL  DL+GR GPFLET+CVPFAGL+I+LWP A
Sbjct: 191 ILGIVVDVFMISFIAIFKSPIMLFKGWHRLFNDLIGREGPFLETICVPFAGLIILLWPLA 250

Query: 186 VVLAVLVGIMSSLGFGCYAAVVAYQ 260
           VV +VL  I SSL  G YA +VAYQ
Sbjct: 251 VVGSVLGSIASSLFLGAYAGIVAYQ 275


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