BLASTX nr result
ID: Coptis25_contig00040604
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00040604
(439 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004157048.1| PREDICTED: uncharacterized protein LOC101227... 108 6e-22
ref|XP_003543854.1| PREDICTED: uncharacterized protein LOC100780... 107 1e-21
ref|XP_002443069.1| hypothetical protein SORBIDRAFT_08g007560 [S... 101 7e-20
gb|AAW56879.1| putative polyprotein [Oryza sativa Japonica Group] 99 4e-19
dbj|BAI39897.1| hAT dimerisation domain-containing protein -like... 99 4e-19
>ref|XP_004157048.1| PREDICTED: uncharacterized protein LOC101227643 [Cucumis sativus]
Length = 411
Score = 108 bits (269), Expect = 6e-22
Identities = 54/85 (63%), Positives = 65/85 (76%)
Frame = -2
Query: 255 IFFGLLV*CSLNLALKNICATKNTEANSETYSECKWITKVVGDVMVVKNFIMNHSMRFSM 76
I + L V ++NLALKNICATKN E N Y EC WI +VGD +VVK FIMNHSMR +M
Sbjct: 67 IIWTLCVVHTVNLALKNICATKNVENNQIVYGECSWIYDIVGDFVVVKFFIMNHSMRLAM 126
Query: 75 FNEYLYLKLLSVAETRFASSIIMLR 1
FNE++ LKLLS+AET F S+IIML+
Sbjct: 127 FNEFVPLKLLSIAETHFPSAIIMLK 151
Score = 89.7 bits (221), Expect = 2e-16
Identities = 45/91 (49%), Positives = 60/91 (65%)
Frame = -1
Query: 430 PMFLKAVNCQGVFKDKHFIANLIKGMIQSIGLLNVVQVITDSAPVC*WCGLLVEEVYPHI 251
PMFLK+V+C G KDK+FIANL+K +I +G NVVQVITD+AP C G L+E +P I
Sbjct: 8 PMFLKSVDCSGEIKDKYFIANLMKEVINEVGYENVVQVITDNAPNCKRVGQLIEAQFPMI 67
Query: 250 FWTPCVVQLESCAKKHMCNKEYRSKLRNVFG 158
WT CVV + A K++C + + V+G
Sbjct: 68 IWTLCVVHTVNLALKNICATKNVENNQIVYG 98
>ref|XP_003543854.1| PREDICTED: uncharacterized protein LOC100780312 [Glycine max]
Length = 557
Score = 107 bits (267), Expect = 1e-21
Identities = 49/76 (64%), Positives = 61/76 (80%)
Frame = -2
Query: 228 SLNLALKNICATKNTEANSETYSECKWITKVVGDVMVVKNFIMNHSMRFSMFNEYLYLKL 49
+LNLALKNICA KNTE N+ Y EC WIT++ D M VKNF+M+HSMR S+FN + LKL
Sbjct: 162 TLNLALKNICAAKNTEKNNVAYEECSWITQIADDAMFVKNFVMSHSMRLSIFNSFNSLKL 221
Query: 48 LSVAETRFASSIIMLR 1
LS+A TRFAS+I+ML+
Sbjct: 222 LSIAPTRFASTIVMLK 237
Score = 89.4 bits (220), Expect = 3e-16
Identities = 40/81 (49%), Positives = 56/81 (69%)
Frame = -1
Query: 439 EIGPMFLKAVNCQGVFKDKHFIANLIKGMIQSIGLLNVVQVITDSAPVC*WCGLLVEEVY 260
E GPMFLKA++C KDK FIA ++ +I +G NVVQ++TD+A VC GL++E +
Sbjct: 91 ESGPMFLKAIDCSNEIKDKDFIAKHMREVIMEVGHSNVVQIVTDNAAVCKAAGLIIEAEF 150
Query: 259 PHIFWTPCVVQLESCAKKHMC 197
P I+WTPCVV + A K++C
Sbjct: 151 PSIYWTPCVVHTLNLALKNIC 171
>ref|XP_002443069.1| hypothetical protein SORBIDRAFT_08g007560 [Sorghum bicolor]
gi|241943762|gb|EES16907.1| hypothetical protein
SORBIDRAFT_08g007560 [Sorghum bicolor]
Length = 713
Score = 101 bits (251), Expect = 7e-20
Identities = 53/91 (58%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Frame = -2
Query: 270 RKYIHIFFGLLV*CSLNLALKNICATK--NTEANSETYSECKWITKVVGDVMVVKNFIMN 97
+KY +IF+ + +LNLALKNICA K TE Y E WIT V GD ++KN+IMN
Sbjct: 290 QKYDNIFWTPCIVHTLNLALKNICAAKLPRTEEQEIVYDELHWITLVAGDANMIKNYIMN 349
Query: 96 HSMRFSMFNEYLYLKLLSVAETRFASSIIML 4
HSMR SMFNE+ LKLL+VAETRFAS ++ML
Sbjct: 350 HSMRLSMFNEFSKLKLLAVAETRFASVVVML 380
Score = 77.4 bits (189), Expect = 1e-12
Identities = 35/78 (44%), Positives = 53/78 (67%)
Frame = -1
Query: 430 PMFLKAVNCQGVFKDKHFIANLIKGMIQSIGLLNVVQVITDSAPVC*WCGLLVEEVYPHI 251
PMFL+A++ G K K FIA + +++ +G NVVQ+ITD+A C GL+V++ Y +I
Sbjct: 236 PMFLRAIDASGEEKTKFFIAEKLIQVVEEVGPKNVVQIITDNAANCKGAGLIVQQKYDNI 295
Query: 250 FWTPCVVQLESCAKKHMC 197
FWTPC+V + A K++C
Sbjct: 296 FWTPCIVHTLNLALKNIC 313
>gb|AAW56879.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2050
Score = 99.0 bits (245), Expect = 4e-19
Identities = 48/90 (53%), Positives = 68/90 (75%)
Frame = -2
Query: 270 RKYIHIFFGLLV*CSLNLALKNICATKNTEANSETYSECKWITKVVGDVMVVKNFIMNHS 91
+KY HIF+ V +LNLALK+ICA KN+ + + + E +WI++V D +KNFIMNHS
Sbjct: 1684 QKYSHIFWTPCVVHTLNLALKSICAAKNS--SGDAFLEFQWISEVAADASAIKNFIMNHS 1741
Query: 90 MRFSMFNEYLYLKLLSVAETRFASSIIMLR 1
MR SMFN++ LK L++A+TRFAS+I+ML+
Sbjct: 1742 MRLSMFNDFSKLKFLAIADTRFASTIVMLK 1771
Score = 84.7 bits (208), Expect = 7e-15
Identities = 42/81 (51%), Positives = 54/81 (66%)
Frame = -1
Query: 439 EIGPMFLKAVNCQGVFKDKHFIANLIKGMIQSIGLLNVVQVITDSAPVC*WCGLLVEEVY 260
E GPMFLKA+ +G K K +IA + +I+ +G NVVQVITD+A C GL+VE+ Y
Sbjct: 1627 EDGPMFLKAIYTEGEIKRKEYIAEKMFAIIEEVGPNNVVQVITDNASNCRAAGLMVEQKY 1686
Query: 259 PHIFWTPCVVQLESCAKKHMC 197
HIFWTPCVV + A K +C
Sbjct: 1687 SHIFWTPCVVHTLNLALKSIC 1707
>dbj|BAI39897.1| hAT dimerisation domain-containing protein -like [Oryza sativa
Indica Group]
Length = 786
Score = 99.0 bits (245), Expect = 4e-19
Identities = 48/90 (53%), Positives = 68/90 (75%)
Frame = -2
Query: 270 RKYIHIFFGLLV*CSLNLALKNICATKNTEANSETYSECKWITKVVGDVMVVKNFIMNHS 91
+KY HIF+ V +LNLALK+ICA KN+ + + + E +WI++V D +KNFIMNHS
Sbjct: 344 QKYSHIFWTPCVVHTLNLALKSICAAKNS--SGDAFLEFQWISEVAADASAIKNFIMNHS 401
Query: 90 MRFSMFNEYLYLKLLSVAETRFASSIIMLR 1
MR SMFN++ LK L++A+TRFAS+I+ML+
Sbjct: 402 MRLSMFNDFSKLKFLAIADTRFASTIVMLK 431
Score = 87.8 bits (216), Expect = 8e-16
Identities = 43/81 (53%), Positives = 55/81 (67%)
Frame = -1
Query: 439 EIGPMFLKAVNCQGVFKDKHFIANLIKGMIQSIGLLNVVQVITDSAPVC*WCGLLVEEVY 260
E GPMFLKA+N +G K K +IA + +I+ +G NVVQVITD+A C GL+VE+ Y
Sbjct: 287 EDGPMFLKAINTEGEIKRKEYIAEKMFAIIEEVGPNNVVQVITDNASNCRAAGLMVEQKY 346
Query: 259 PHIFWTPCVVQLESCAKKHMC 197
HIFWTPCVV + A K +C
Sbjct: 347 SHIFWTPCVVHTLNLALKSIC 367