BLASTX nr result

ID: Coptis25_contig00040585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040585
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270551.1| PREDICTED: uncharacterized protein LOC100259...   148   4e-34
dbj|BAD43365.1| adenosylmethionine-8-amino-7-oxononanoate aminot...   133   1e-29
pdb|4A0G|A Chain A, Structure Of Bifunctional Dapa Aminotransfer...   133   1e-29
ref|NP_200567.2| adenosylmethionine-8-amino-7-oxononanoate amino...   133   1e-29
pdb|4A0F|A Chain A, Structure Of Selenomethionine Substituted Bi...   129   3e-28

>ref|XP_002270551.1| PREDICTED: uncharacterized protein LOC100259784 [Vitis vinifera]
           gi|297735352|emb|CBI17792.3| unnamed protein product
           [Vitis vinifera]
          Length = 863

 Score =  148 bits (374), Expect = 4e-34
 Identities = 74/113 (65%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
 Frame = -1

Query: 336 LFLDPPTTFICNGCWVLSLPKILHSEKLKPEDMTFSSRKELFSGSRSGSELARTYSAYIS 157
           LFLDPPT F+C+G W LSLP+ + SEKLK E++TF SR E FS SR GS LA +YS++IS
Sbjct: 553 LFLDPPTIFMCDGIWKLSLPEGVQSEKLKQEELTFQSRGEFFSKSRDGSSLAGSYSSFIS 612

Query: 156 QQLLLCSGSED-AHIGALIIEPVIQASGGMHMVDPLFQRILVTECQNRKIPEI 1
           QQL   SG     HIGALIIEPV+  SGGMHM+DPLFQR+LV EC++RKIP I
Sbjct: 613 QQLSAYSGLRGFGHIGALIIEPVVHGSGGMHMIDPLFQRVLVNECRSRKIPVI 665


>dbj|BAD43365.1| adenosylmethionine-8-amino-7-oxononanoate aminotransferase-like
           protein [Arabidopsis thaliana]
           gi|126215756|gb|ABN80998.1| DAPA aminotransferase
           [Arabidopsis thaliana] gi|156125021|gb|ABU50829.1|
           dethiobiotin synthetase [Arabidopsis thaliana]
          Length = 451

 Score =  133 bits (335), Expect = 1e-29
 Identities = 69/113 (61%), Positives = 83/113 (73%), Gaps = 1/113 (0%)
 Frame = -1

Query: 336 LFLDPPTTFICNGCWVLSLPKILHSEKLKPEDMTFSSRKELFSGSRSGSELARTYSAYIS 157
           LFLDPPT F+ NG W +SLP+     ++ PE  TF+SR E+F  SR  S LAR YSAY+S
Sbjct: 143 LFLDPPTVFLSNGSWNISLPESF--SEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLS 200

Query: 156 QQLLLCSG-SEDAHIGALIIEPVIQASGGMHMVDPLFQRILVTECQNRKIPEI 1
           + L   SG  + AH+GALIIEPVI  +GGMHMVDPLFQR+LV EC+NRKIP I
Sbjct: 201 KHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVI 253


>pdb|4A0G|A Chain A, Structure Of Bifunctional Dapa Aminotransferase-Dtb
           Synthetase From Arabidopsis Thaliana In Its Apo Form.
           gi|390980933|pdb|4A0G|B Chain B, Structure Of
           Bifunctional Dapa Aminotransferase-Dtb Synthetase From
           Arabidopsis Thaliana In Its Apo Form.
           gi|390980934|pdb|4A0G|C Chain C, Structure Of
           Bifunctional Dapa Aminotransferase-Dtb Synthetase From
           Arabidopsis Thaliana In Its Apo Form.
           gi|390980935|pdb|4A0G|D Chain D, Structure Of
           Bifunctional Dapa Aminotransferase-Dtb Synthetase From
           Arabidopsis Thaliana In Its Apo Form.
           gi|390980936|pdb|4A0H|A Chain A, Structure Of
           Bifunctional Dapa Aminotransferase-Dtb Synthetase From
           Arabidopsis Thaliana Bound To 7-Keto 8-Amino Pelargonic
           Acid (Kapa) gi|390980937|pdb|4A0H|B Chain B, Structure
           Of Bifunctional Dapa Aminotransferase-Dtb Synthetase
           From Arabidopsis Thaliana Bound To 7-Keto 8-Amino
           Pelargonic Acid (Kapa) gi|390980938|pdb|4A0R|A Chain A,
           Structure Of Bifunctional Dapa Aminotransferase-Dtb
           Synthetase From Arabidopsis Thaliana Bound To
           Dethiobiotin (Dtb). gi|390980939|pdb|4A0R|B Chain B,
           Structure Of Bifunctional Dapa Aminotransferase-Dtb
           Synthetase From Arabidopsis Thaliana Bound To
           Dethiobiotin (Dtb)
          Length = 831

 Score =  133 bits (335), Expect = 1e-29
 Identities = 69/113 (61%), Positives = 83/113 (73%), Gaps = 1/113 (0%)
 Frame = -1

Query: 336 LFLDPPTTFICNGCWVLSLPKILHSEKLKPEDMTFSSRKELFSGSRSGSELARTYSAYIS 157
           LFLDPPT F+ NG W +SLP+     ++ PE  TF+SR E+F  SR  S LAR YSAY+S
Sbjct: 523 LFLDPPTVFLSNGSWNISLPESF--SEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLS 580

Query: 156 QQLLLCSG-SEDAHIGALIIEPVIQASGGMHMVDPLFQRILVTECQNRKIPEI 1
           + L   SG  + AH+GALIIEPVI  +GGMHMVDPLFQR+LV EC+NRKIP I
Sbjct: 581 KHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVI 633


>ref|NP_200567.2| adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Arabidopsis thaliana]
           gi|391737955|sp|B0F481.1|BIODA_ARATH RecName:
           Full=Bifunctional dethiobiotin
           synthetase/7,8-diamino-pelargonic acid aminotransferase,
           mitochondrial; AltName: Full=Bifunctional BIO3-BIO1
           protein; Includes: RecName: Full=Dethiobiotin
           synthetase; AltName: Full=DTB synthetase; Short=DTBS;
           AltName: Full=Protein BIOTIN AUXOTROPH 3; Includes:
           RecName: Full=7,8-diamino-pelargonic acid
           aminotransferase; Short=DAPA AT; Short=DAPA
           aminotransferase; AltName: Full=7,8-diaminononanoate
           synthase; Short=DANS; AltName:
           Full=Adenosylmethionine-8-amino-7-oxononanoate
           aminotransferase; AltName: Full=Diaminopelargonic acid
           synthase; AltName: Full=Protein BIOTIN AUXOTROPH 1;
           Flags: Precursor gi|158726301|gb|ABW80569.1|
           mitochondrial bifunctional diaminopelargonate
           synthase-dethiobiotin synthetase [Arabidopsis thaliana]
           gi|332009541|gb|AED96924.1|
           adenosylmethionine-8-amino-7-oxononanoate
           aminotransferase [Arabidopsis thaliana]
           gi|364285679|gb|AEW48251.1| bifunctional BIO3-BIO1
           [Arabidopsis thaliana]
          Length = 833

 Score =  133 bits (335), Expect = 1e-29
 Identities = 69/113 (61%), Positives = 83/113 (73%), Gaps = 1/113 (0%)
 Frame = -1

Query: 336 LFLDPPTTFICNGCWVLSLPKILHSEKLKPEDMTFSSRKELFSGSRSGSELARTYSAYIS 157
           LFLDPPT F+ NG W +SLP+     ++ PE  TF+SR E+F  SR  S LAR YSAY+S
Sbjct: 525 LFLDPPTVFLSNGSWNISLPESF--SEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLS 582

Query: 156 QQLLLCSG-SEDAHIGALIIEPVIQASGGMHMVDPLFQRILVTECQNRKIPEI 1
           + L   SG  + AH+GALIIEPVI  +GGMHMVDPLFQR+LV EC+NRKIP I
Sbjct: 583 KHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVI 635


>pdb|4A0F|A Chain A, Structure Of Selenomethionine Substituted Bifunctional
           Dapa Aminotransferase-Dethiobiotin Synthetase From
           Arabidopsis Thaliana In Its Apo Form.
           gi|390980931|pdb|4A0F|B Chain B, Structure Of
           Selenomethionine Substituted Bifunctional Dapa
           Aminotransferase-Dethiobiotin Synthetase From
           Arabidopsis Thaliana In Its Apo Form
          Length = 831

 Score =  129 bits (323), Expect = 3e-28
 Identities = 67/113 (59%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
 Frame = -1

Query: 336 LFLDPPTTFICNGCWVLSLPKILHSEKLKPEDMTFSSRKELFSGSRSGSELARTYSAYIS 157
           LFLDPPT F+ NG W +SLP+     ++ PE  TF+SR E+F  SR  S LAR YSAY+S
Sbjct: 523 LFLDPPTVFLSNGSWNISLPESF--SEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLS 580

Query: 156 QQLLLCSG-SEDAHIGALIIEPVIQASGGMHMVDPLFQRILVTECQNRKIPEI 1
           + L   SG  + AH+GALIIEPVI  +GG H VDPLFQR+LV EC+NRKIP I
Sbjct: 581 KHLQEHSGVRQSAHVGALIIEPVIHGAGGXHXVDPLFQRVLVNECRNRKIPVI 633


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