BLASTX nr result

ID: Coptis25_contig00040581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040581
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316313.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_003622949.1| hypothetical protein MTR_7g058710 [Medicago ...    74   1e-11
ref|XP_003622948.1| Tyrosine/dopa decarboxylase [Medicago trunca...    74   1e-11
gb|EAY72582.1| hypothetical protein OsI_00448 [Oryza sativa Indi...    73   3e-11
gb|ABK94459.1| unknown [Populus trichocarpa]                           72   4e-11

>ref|XP_002316313.1| predicted protein [Populus trichocarpa] gi|222865353|gb|EEF02484.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/96 (38%), Positives = 65/96 (67%)
 Frame = +2

Query: 146 EMTLKVMLRKSSNNLLYAESQEDFIEFLLNLLVIPVGAAVGLLNKTPLLGSISNLYRSVE 325
           ++ LK+++    N +++AE+ +DF++FLL+LL +PVG  + LL K+ ++GSI+N+Y S+E
Sbjct: 5   KINLKLLIDSKHNRVVFAEAGKDFVDFLLSLLALPVGTVIRLLTKSTMIGSIANIYGSLE 64

Query: 326 ELDDSGYIKGECFKSKLLSPEISAKENYQIQLLHST 433
           +LD+S Y++    K  +L P I+ +   Q  LL  T
Sbjct: 65  KLDES-YMQPNQNKDSILKPTITTQVTNQNFLLPDT 99


>ref|XP_003622949.1| hypothetical protein MTR_7g058710 [Medicago truncatula]
           gi|355497964|gb|AES79167.1| hypothetical protein
           MTR_7g058710 [Medicago truncatula]
          Length = 484

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 11/134 (8%)
 Frame = +2

Query: 56  LLLRSVESHSKLMFNKK-GPVEHEIKFKPCK----------EMTLKVMLRKSSNNLLYAE 202
           L L S  S + L+F KK   V + +K   CK          ++++KV+ RKS+ ++L+AE
Sbjct: 212 LSLVSKTSLTDLIFKKKYSEVVNGLKDPICKIGKATSEGGRQISVKVVRRKSTGDILFAE 271

Query: 203 SQEDFIEFLLNLLVIPVGAAVGLLNKTPLLGSISNLYRSVEELDDSGYIKGECFKSKLLS 382
           + +DFI F+ + L +P+G  + +L     L SI NLY+S+ EL    Y+  +  K KL+S
Sbjct: 272 AGDDFINFIFSFLTLPLGGVLHMLEGFSSLNSIDNLYKSLTELSSECYLILKHLKEKLIS 331

Query: 383 PEISAKENYQIQLL 424
           P I+A+  +  Q++
Sbjct: 332 PPIAAQFGFDNQII 345



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/92 (41%), Positives = 55/92 (59%)
 Frame = +2

Query: 134 KPCKEMTLKVMLRKSSNNLLYAESQEDFIEFLLNLLVIPVGAAVGLLNKTPLLGSISNLY 313
           K   ++TL+VM+ K  N +LYAE+ +DFIE L + L +P+G AV         GSIS+LY
Sbjct: 8   KSVDKVTLRVMVDKERNKVLYAEAGKDFIEVLFSFLTLPLGTAV-------KFGSISSLY 60

Query: 314 RSVEELDDSGYIKGECFKSKLLSPEISAKENY 409
           +SV  LD+  Y+     K  LL P  ++ E+Y
Sbjct: 61  QSVANLDEQ-YLWTRTCKEMLLRPR-NSMESY 90


>ref|XP_003622948.1| Tyrosine/dopa decarboxylase [Medicago truncatula]
            gi|355497963|gb|AES79166.1| Tyrosine/dopa decarboxylase
            [Medicago truncatula]
          Length = 928

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
 Frame = +2

Query: 86   KLMFNKKGPVEHEI-KFKPCK-EMTLKVMLRKSSNNLLYAESQEDFIEFLLNLLVIPVGA 259
            KL F  K P+   I K K  K ++++KV+ RKS+  +L+AE+++DFI F+ + L  P+G 
Sbjct: 730  KLSFVSKTPLTDFIFKKKYLKWQISVKVVRRKSTGEILFAEARDDFINFIFSFLTFPLGG 789

Query: 260  AVGLLNKTPLLGSISNLYRSVEELDDSGYIKGECFKSKLLSPEISAKENYQIQ 418
             + +L     L  I NLY+SV EL    Y+     K KL++P I+A+  Y +Q
Sbjct: 790  VLHMLQGFSSLNCIDNLYKSVTELSPETYLISNHLKEKLINPPIAAQFGYLLQ 842


>gb|EAY72582.1| hypothetical protein OsI_00448 [Oryza sativa Indica Group]
          Length = 250

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/81 (40%), Positives = 57/81 (70%)
 Frame = +2

Query: 149 MTLKVMLRKSSNNLLYAESQEDFIEFLLNLLVIPVGAAVGLLNKTPLLGSISNLYRSVEE 328
           +++K+++  ++  +L+AE+ +D ++FL +LL +PVG AV LL K  ++G + NLY SVE 
Sbjct: 11  LSMKLLVDTNAQRVLFAEASKDVVDFLFSLLALPVGTAVKLLGKDSMVGCVGNLYASVER 70

Query: 329 LDDSGYIKGECFKSKLLSPEI 391
           LDD+ Y++ +  K  LLSP +
Sbjct: 71  LDDT-YVQADAAKDALLSPVV 90


>gb|ABK94459.1| unknown [Populus trichocarpa]
          Length = 237

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/85 (40%), Positives = 61/85 (71%)
 Frame = +2

Query: 146 EMTLKVMLRKSSNNLLYAESQEDFIEFLLNLLVIPVGAAVGLLNKTPLLGSISNLYRSVE 325
           +++LK+++    N +++AE+ +DF++FLL+LL +PVG  + LL K+ ++G IS+LY S+E
Sbjct: 5   KISLKLLIDSKHNKVVFAEAGKDFVDFLLSLLALPVGTVIRLLTKSTMIGCISSLYGSLE 64

Query: 326 ELDDSGYIKGECFKSKLLSPEISAK 400
           +LD+S Y++    K  LL P I+ +
Sbjct: 65  KLDES-YLQPNQNKGSLLKPTITTQ 88


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