BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040553
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531146.1| nucleic acid binding protein, putative [Rici...    88   6e-16
gb|AFW68706.1| putative RING zinc finger domain superfamily prot...    80   2e-13
dbj|BAK07063.1| predicted protein [Hordeum vulgare subsp. vulgare]     79   5e-13
ref|NP_001235666.1| uncharacterized protein LOC100527665 [Glycin...    76   2e-12
ref|XP_003517159.1| PREDICTED: RING-H2 finger protein ATL44-like...    76   3e-12

>ref|XP_002531146.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223529259|gb|EEF31231.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 137

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 38/91 (41%), Positives = 60/91 (65%), Gaps = 4/91 (4%)
 Frame = -2

Query: 274 INLRKISSQEVSYLVFESNFLKQQNEDAHISSAVGAAT----ENGGEYCSVCLSGLKGGD 107
           + ++ ++S E + L    N     ++D  ++S  G+ +    E  GE+C VCLS LKGG+
Sbjct: 20  LRIKDVTSYEATALNVSEN-----SKDGELTSPGGSCSAETAEAEGEFCCVCLSRLKGGE 74

Query: 106 EIRKLPCLHEFHKVCVDRWLDLCRRTCPLCR 14
            +R LPC+H FH+VC+DRW ++CR+TCP+CR
Sbjct: 75  NMRVLPCMHRFHRVCIDRWFNVCRKTCPVCR 105


>gb|AFW68706.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 138

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 35/61 (57%), Positives = 41/61 (67%)
 Frame = -2

Query: 196 DAHISSAVGAATENGGEYCSVCLSGLKGGDEIRKLPCLHEFHKVCVDRWLDLCRRTCPLC 17
           D H +SA G        YC VC+S  + GD++R LPC H FH+ CVDRWL LCRRTCPLC
Sbjct: 53  DDHPASAAG--------YCCVCISACRDGDDVRSLPCGHAFHRDCVDRWLALCRRTCPLC 104

Query: 16  R 14
           R
Sbjct: 105 R 105


>dbj|BAK07063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 110

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 31/46 (67%), Positives = 37/46 (80%)
 Frame = -2

Query: 151 GEYCSVCLSGLKGGDEIRKLPCLHEFHKVCVDRWLDLCRRTCPLCR 14
           GE C VCLS ++GG+  R+LPC H FH+ CVDRWL LC+RTCPLCR
Sbjct: 28  GEECCVCLSRIRGGEATRRLPCEHAFHRDCVDRWLALCKRTCPLCR 73


>ref|NP_001235666.1| uncharacterized protein LOC100527665 [Glycine max]
           gi|255632902|gb|ACU16805.1| unknown [Glycine max]
          Length = 101

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 34/66 (51%), Positives = 42/66 (63%)
 Frame = -2

Query: 205 QNEDAHISSAVGAATENGGEYCSVCLSGLKGGDEIRKLPCLHEFHKVCVDRWLDLCRRTC 26
           QN     S +  A+  N   +C VCLS LK  DEIR LPC H+FHK+CV++WL    +TC
Sbjct: 7   QNNKQQSSESASASNFNEDSWCCVCLSRLKAKDEIRVLPCSHKFHKICVNKWLKGRHKTC 66

Query: 25  PLCRSS 8
           PLCR S
Sbjct: 67  PLCRFS 72


>ref|XP_003517159.1| PREDICTED: RING-H2 finger protein ATL44-like [Glycine max]
          Length = 133

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/78 (46%), Positives = 50/78 (64%)
 Frame = -2

Query: 241 SYLVFESNFLKQQNEDAHISSAVGAATENGGEYCSVCLSGLKGGDEIRKLPCLHEFHKVC 62
           SY++  S+ ++   + +  S++  A+  N   +C VCLS LK  DEIR LPC H+FHK C
Sbjct: 29  SYML--SSHIESNKQQSSESTSASASNFNEDSWCCVCLSRLKAKDEIRVLPCSHKFHKSC 86

Query: 61  VDRWLDLCRRTCPLCRSS 8
           V+RWL    +TCPLCR S
Sbjct: 87  VNRWLKGRHKTCPLCRFS 104