BLASTX nr result

ID: Coptis25_contig00040543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040543
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523552.1| conserved hypothetical protein [Ricinus comm...    92   4e-17
gb|AFY26888.1| stress induced protein [Morella rubra]                  85   7e-15
ref|XP_002308687.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_003542626.1| PREDICTED: uncharacterized protein LOC100804...    82   6e-14
ref|XP_002325163.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14

>ref|XP_002523552.1| conserved hypothetical protein [Ricinus communis]
           gi|223537259|gb|EEF38891.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 153

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/98 (50%), Positives = 63/98 (64%), Gaps = 10/98 (10%)
 Frame = -1

Query: 325 RWKPRSNNDQIGLLHPXXXXQESWVVKSGKKLREISEMVAGPKWKNFIRKFSAY-----R 161
           RW+    N+   LL      +E+WVVK  KK++E+SE+VAGP+WK FIRK SAY     R
Sbjct: 46  RWEQNHGNEHGHLL---GEQRETWVVKKLKKVKEVSEVVAGPRWKTFIRKISAYIKKMKR 102

Query: 160 NNKKRTQFQYDPQSYALNFEDSQEEDD-----FSGRFA 62
           +     QFQYDP+SYALNF+  +EEDD     FS RF+
Sbjct: 103 HKNNNNQFQYDPESYALNFDGDREEDDLLVPIFSSRFS 140


>gb|AFY26888.1| stress induced protein [Morella rubra]
          Length = 134

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/96 (44%), Positives = 63/96 (65%), Gaps = 7/96 (7%)
 Frame = -1

Query: 325 RWKPRSNNDQIGLLHPXXXXQESWVVKSGKKLREISEMVAGPKWKNFIRKFSAYRNNKK- 149
           RW    + +   LL      +++W ++   K+++++E++AGPKWK FIRKFSAY N +K 
Sbjct: 32  RWSQSKDKESRYLLQQKGEYRQTWWMEQVIKVKQVTEVIAGPKWKTFIRKFSAYGNKRKQ 91

Query: 148 RTQFQYDPQSYALNFED--SQEEDD----FSGRFAA 59
           +  FQYDPQSYALNF+    +E+DD    FS RF+A
Sbjct: 92  KNGFQYDPQSYALNFDSGFDREDDDLVLGFSSRFSA 127


>ref|XP_002308687.1| predicted protein [Populus trichocarpa] gi|222854663|gb|EEE92210.1|
           predicted protein [Populus trichocarpa]
          Length = 152

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/74 (52%), Positives = 52/74 (70%), Gaps = 6/74 (8%)
 Frame = -1

Query: 262 ESWVVKSGKKLREISEMVAGPKWKNFIRKFSAYRNNKKRTQFQYDPQSYALNFED----- 98
           + W+V+  K+++EISE++AGPKWKNFIR+FS     + R Q QYDPQSYALNF++     
Sbjct: 61  DGWLVEKVKRVKEISEILAGPKWKNFIRRFSNNNKKRSRMQCQYDPQSYALNFDEGFGRE 120

Query: 97  -SQEEDDFSGRFAA 59
              E  DFS R+AA
Sbjct: 121 VDSEYPDFSARYAA 134


>ref|XP_003542626.1| PREDICTED: uncharacterized protein LOC100804202 [Glycine max]
          Length = 141

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
 Frame = -1

Query: 325 RWKPRSNNDQIGLLHPXXXXQESWVVKSGKKLREISEMVAGPKWKNFIRKFSAY--RNNK 152
           +W      +  GLL       ESWVV+  +K +E+SE++AGPKWK FIRK S Y  +  +
Sbjct: 37  KWWQGHEEEGKGLLVDQKGEGESWVVEKLRKAKEVSEVIAGPKWKTFIRKISGYGKKVKQ 96

Query: 151 KRTQFQYDPQSYALNFEDSQEEDD------FSGRFAA 59
           +R +FQYD  SYALNF    + +D      FS RFAA
Sbjct: 97  QRNRFQYDEHSYALNFNSGAQSEDEGMPHSFSSRFAA 133


>ref|XP_002325163.1| predicted protein [Populus trichocarpa] gi|222866597|gb|EEF03728.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 45/93 (48%), Positives = 61/93 (65%), Gaps = 7/93 (7%)
 Frame = -1

Query: 313 RSNNDQIGLLHPXXXXQESWVVKSGKKLREISEMVAGPKWKNFIRKFSAYRNNKKR--TQ 140
           R+N  +  +L+      + W+V+  KK++E SE++AGPKWK FIRK SAY   KK+   Q
Sbjct: 52  RNNEREYDVLNQNGDSSDPWLVRKLKKVKEASEVLAGPKWKTFIRKISAYIKKKKQRNNQ 111

Query: 139 FQYDPQSYALNFEDSQEEDD-----FSGRFAAS 56
            QYD +SYALNF+  +EEDD     FS RFAA+
Sbjct: 112 SQYDAESYALNFD--REEDDCLIPGFSSRFAAA 142


Top