BLASTX nr result

ID: Coptis25_contig00040535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040535
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]   172   4e-42
emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]   169   9e-41
gb|ACB28472.1| polyprotein [Ananas comosus]                           170   1e-40
emb|CAN64437.1| hypothetical protein VITISV_011228 [Vitis vinifera]   167   5e-40
ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209...   161   9e-38

>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score =  172 bits (437), Expect(2) = 4e-42
 Identities = 99/213 (46%), Positives = 119/213 (55%), Gaps = 2/213 (0%)
 Frame = -1

Query: 674  GRHFKIYTDHRSLKYFLEQRLSSIEHQKWLSKILGYYYEIIYRRGTEHQVADALSHVHEX 495
            GR F I TD RSLKY LEQR+ + E QKW+SK++GY YEI+Y+ G  +Q ADALS     
Sbjct: 787  GRRFTIQTDQRSLKYLLEQRIITPEQQKWMSKLVGYDYEIVYKPGKTNQAADALSRNMTS 846

Query: 494  XXXXXXXXXXXXXXXXXTRECNSTDSMCAIIHKIQHSSSPKKHYSYVNER--NKGRIVVV 321
                               E NS   M  I      +  P++ Y + N       RIVV 
Sbjct: 847  PCLNVFFVPQVQVWDEIRHEANSNPYMQRIGQLA--TKQPRQPYQWRNGLVCYNNRIVVP 904

Query: 320  PSSSWCSKLLHEFHATPAGGHSGFLRTYKRLQVNFY*PSMKRDTKTFVIHCDVCQRNKVE 141
            P S     LL EFH TP GGHS  LRTYKRL   FY PSM+R    +V  CDVCQ+ K E
Sbjct: 905  PGSPLIHCLLREFHDTPMGGHSRILRTYKRLSQQFYWPSMRRSVHQYVAACDVCQKAKAE 964

Query: 140  AISPPGLLNPLSIPDDVWIDISVDFIEGLRSSN 42
             +SP GLL PL IP  VW DI++DFI+GL  S+
Sbjct: 965  TMSPAGLLQPLPIPCQVWDDITMDFIDGLPRSD 997



 Score = 25.0 bits (53), Expect(2) = 4e-42
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = -2

Query: 40   GKTAILVIVDRLS 2
            GKT+I+V+VDRLS
Sbjct: 998  GKTSIMVVVDRLS 1010


>emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]
          Length = 647

 Score =  169 bits (429), Expect(2) = 9e-41
 Identities = 96/218 (44%), Positives = 124/218 (56%), Gaps = 4/218 (1%)
 Frame = -1

Query: 674 GRHFKIYTDHRSLKYFLEQRLSSIEHQKWLSKILGYYYEIIYRRGTEHQVADALSHVHEX 495
           G+ F I T+ RSLKY LEQR+ ++E QKW++K+LGY YEI+Y+ G E+   DALS V   
Sbjct: 75  GQKFYIQTNQRSLKYLLEQRVVTLEQQKWVAKLLGYDYEILYKPGRENSAVDALSRVPSS 134

Query: 494 XXXXXXXXXXXXXXXXXTRECNSTDSMCAIIHKIQHSSSPKKHYSYVNERN----KGRIV 327
                             +   + D+    I K+   ++ K    Y N +     K R+V
Sbjct: 135 LTFNALFVSQAKIWEEI-KTAAADDAYMTCISKL---AATKPGLPYTNRQGLTFYKNRVV 190

Query: 326 VVPSSSWCSKLLHEFHATPAGGHSGFLRTYKRLQVNFY*PSMKRDTKTFVIHCDVCQRNK 147
           V P S   ++LL EFH +P GGHSG LRTYKR+   FY PSM R    +V  CDVCQR K
Sbjct: 191 VPPQSHIPNQLLREFHDSPLGGHSGVLRTYKRIAQQFYWPSMYRMVNEYVSSCDVCQRAK 250

Query: 146 VEAISPPGLLNPLSIPDDVWIDISVDFIEGLRSSNREN 33
              +SP GLL PL IP  VW DI++DFIEGL  S  +N
Sbjct: 251 ASTLSPAGLLQPLPIPCQVWDDITMDFIEGLPPSQGKN 288



 Score = 23.5 bits (49), Expect(2) = 9e-41
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 40  GKTAILVIVDRLS 2
           GK  ILV+VDRLS
Sbjct: 286 GKNTILVVVDRLS 298


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  170 bits (430), Expect(2) = 1e-40
 Identities = 90/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%)
 Frame = -1

Query: 674  GRHFKIYTDHRSLKYFLEQRLSSIEHQKWLSKILGYYYEIIYRRGTEHQVADALSHVHEX 495
            GRHFKI TDH+SLKY +EQR+S+   QKW++K++GY YE+IY++G E+ VADALS     
Sbjct: 583  GRHFKIKTDHQSLKYLMEQRVSTPSQQKWVAKLMGYDYELIYKKGQENVVADALSRSPTL 642

Query: 494  XXXXXXXXXXXXXXXXXTRECNSTDSMCAIIHKIQHSSSPKKHYSYVNE--RNKGRIVVV 321
                                 N  D +  II + Q   +    Y++V +  R KG++VV 
Sbjct: 643  LAVSAIHTDLLDQIKWSW---NVDDKLKKIIQQKQSDINSWPRYTWVQDQLRRKGKLVVG 699

Query: 320  PSSSWCSKLLHEFHATPAGGHSGFLRTYKRLQVNFY*PSMKRDTKTFVIHCDVCQRNKVE 141
                   +L+H FHA+  GGHSG   T ++L+  FY   ++RD + FV  C VCQ+NK E
Sbjct: 700  SDPGLKLQLIHNFHASSIGGHSGMEATTRKLKGQFYWKGLRRDVEQFVRECSVCQQNKYE 759

Query: 140  AISPPGLLNPLSIPDDVWIDISVDFIEGLRSS 45
              +P GLL PL IP+ +W +IS+DFIEGL +S
Sbjct: 760  TTAPAGLLQPLPIPEGIWTEISMDFIEGLPNS 791



 Score = 22.3 bits (46), Expect(2) = 1e-40
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 40  GKTAILVIVDRLS 2
           GK  I+V+VDRLS
Sbjct: 793 GKEVIMVVVDRLS 805


>emb|CAN64437.1| hypothetical protein VITISV_011228 [Vitis vinifera]
          Length = 623

 Score =  167 bits (422), Expect(2) = 5e-40
 Identities = 95/218 (43%), Positives = 122/218 (55%), Gaps = 4/218 (1%)
 Frame = -1

Query: 674 GRHFKIYTDHRSLKYFLEQRLSSIEHQKWLSKILGYYYEIIYRRGTEHQVADALSHVHEX 495
           G+ F I TD RSLKY LEQR+ + E QKW++K+LGY YEI+Y+   E+  ADALS V   
Sbjct: 67  GQKFYIQTDQRSLKYLLEQRVVTPEQQKWVAKLLGYDYEILYKPSCENSTADALSRV--- 123

Query: 494 XXXXXXXXXXXXXXXXXTRECNSTDSMCAIIHKIQHSSSPKKHYSYVNERN----KGRIV 327
                              E  +  +  A + +I   ++ K    Y N +     K R+V
Sbjct: 124 -PGSPTLNALFVSQAKIWEEIKTVAADDAYMARISKLAATKPGLPYTNRQGLTFYKNRVV 182

Query: 326 VVPSSSWCSKLLHEFHATPAGGHSGFLRTYKRLQVNFY*PSMKRDTKTFVIHCDVCQRNK 147
           V P S   ++LL EFH +P GGHSG LRTYKR+   FY PSM R    ++  CDVCQR K
Sbjct: 183 VPPQSHIPNQLLREFHDSPLGGHSGVLRTYKRIAQQFYWPSMYRMVNEYISSCDVCQRAK 242

Query: 146 VEAISPPGLLNPLSIPDDVWIDISVDFIEGLRSSNREN 33
              +S  GLL PL IP  VW DI++DFIEGL  S  +N
Sbjct: 243 ASTLSSTGLLQPLPIPCQVWDDITMDFIEGLPPSQGKN 280



 Score = 23.5 bits (49), Expect(2) = 5e-40
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 40  GKTAILVIVDRLS 2
           GK  ILV+VDRLS
Sbjct: 278 GKNTILVVVDRLS 290


>ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209704 [Cucumis sativus]
          Length = 1503

 Score =  161 bits (408), Expect = 9e-38
 Identities = 87/216 (40%), Positives = 123/216 (56%), Gaps = 2/216 (0%)
 Frame = -1

Query: 674  GRHFKIYTDHRSLKYFLEQRLSSIEHQKWLSKILGYYYEIIYRRGTEHQVADALSHVHEX 495
            GR F I +D R+LK+ LEQR    + QKWL+K+LGY +EI+Y+ G +++ ADALS + + 
Sbjct: 1195 GRKFTIISDQRALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRIEQP 1254

Query: 494  XXXXXXXXXXXXXXXXXTRECNSTDSMCAIIHKIQHSSSPKKHYSYVNER--NKGRIVVV 321
                              +E    + + AII +++ +      + +VN     K RIV+ 
Sbjct: 1255 VEMKNMSTTGIVNMEVVEKEVELDEELKAIIEELKQNPDEPSKFQWVNGNLWYKKRIVLS 1314

Query: 320  PSSSWCSKLLHEFHATPAGGHSGFLRTYKRLQVNFY*PSMKRDTKTFVIHCDVCQRNKVE 141
              S+    LLH FH +  GGHSGFLRTYKR+    Y   MK D K +V  C+VCQRNK+E
Sbjct: 1315 KESTLIPTLLHTFHDSILGGHSGFLRTYKRMCGELYWKGMKADVKKYVQECEVCQRNKLE 1374

Query: 140  AISPPGLLNPLSIPDDVWIDISVDFIEGLRSSNREN 33
            A  P G+L P+ IP+ +  D S+DFIEGL  +   N
Sbjct: 1375 ATKPAGVLQPIPIPERILEDWSMDFIEGLPKAGGMN 1410


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