BLASTX nr result

ID: Coptis25_contig00040522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040522
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67178.1| hypothetical protein VITISV_037456 [Vitis vinifera]   128   4e-28
ref|XP_002278578.1| PREDICTED: uncharacterized protein LOC100261...   127   9e-28
ref|XP_002312533.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002517130.1| conserved hypothetical protein [Ricinus comm...   117   1e-24
ref|XP_002314697.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24

>emb|CAN67178.1| hypothetical protein VITISV_037456 [Vitis vinifera]
          Length = 428

 Score =  128 bits (322), Expect = 4e-28
 Identities = 60/96 (62%), Positives = 74/96 (77%)
 Frame = -3

Query: 293 TSKPPDFSTILASQRFFIASPGHSNSIVDSTDSNYLPEPEALIAGGIPIRTHSPNPYIDF 114
           +  PPDF+T+ ASQRFF +SPG SNSI ++++S   PE +A++ GG+ + T+SPNPY DF
Sbjct: 88  SESPPDFATVFASQRFFFSSPGRSNSIFEASESP--PESDAIVNGGVAVHTYSPNPYEDF 145

Query: 113 RESMVEMVEARELFDVRGDWDGLHELLLCYLALNPK 6
           R SM EM EAREL DV  DWD LHELLLCYL LNPK
Sbjct: 146 RRSMQEMAEARELRDVAADWDYLHELLLCYLTLNPK 181


>ref|XP_002278578.1| PREDICTED: uncharacterized protein LOC100261343 [Vitis vinifera]
          Length = 223

 Score =  127 bits (319), Expect = 9e-28
 Identities = 59/96 (61%), Positives = 74/96 (77%)
 Frame = -3

Query: 293 TSKPPDFSTILASQRFFIASPGHSNSIVDSTDSNYLPEPEALIAGGIPIRTHSPNPYIDF 114
           +  PPDF+T+ ASQRFF +SPG SNSI ++++S   PE ++++ GG+ + T+SPNPY DF
Sbjct: 88  SESPPDFATVFASQRFFFSSPGRSNSIFEASESP--PESDSIVNGGVAVHTYSPNPYEDF 145

Query: 113 RESMVEMVEARELFDVRGDWDGLHELLLCYLALNPK 6
           R SM EM EAREL DV  DWD LHELLLCYL LNPK
Sbjct: 146 RRSMQEMAEARELRDVAADWDYLHELLLCYLTLNPK 181


>ref|XP_002312533.1| predicted protein [Populus trichocarpa] gi|222852353|gb|EEE89900.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/91 (62%), Positives = 70/91 (76%)
 Frame = -3

Query: 278 DFSTILASQRFFIASPGHSNSIVDSTDSNYLPEPEALIAGGIPIRTHSPNPYIDFRESMV 99
           DF+TILASQR F +SPG SNSI++S     LPEP+  ++GG+ I+ +SP+PY DF+ SM 
Sbjct: 90  DFATILASQRLFFSSPGRSNSIIES-----LPEPQTPVSGGVAIKKYSPDPYTDFKHSMQ 144

Query: 98  EMVEARELFDVRGDWDGLHELLLCYLALNPK 6
           EM+EAREL DVR  WD LHELL CYL LNPK
Sbjct: 145 EMIEARELRDVRAKWDYLHELLSCYLKLNPK 175


>ref|XP_002517130.1| conserved hypothetical protein [Ricinus communis]
           gi|223543765|gb|EEF45293.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/93 (58%), Positives = 72/93 (77%)
 Frame = -3

Query: 284 PPDFSTILASQRFFIASPGHSNSIVDSTDSNYLPEPEALIAGGIPIRTHSPNPYIDFRES 105
           PPDF+ I ASQRFF +SPG SNSI++S ++    EP+  + GG+ ++ +SP+PY DFR+S
Sbjct: 93  PPDFAAIFASQRFFFSSPGRSNSIIESPETPSA-EPQTPLNGGVAVKKYSPDPYADFRQS 151

Query: 104 MVEMVEARELFDVRGDWDGLHELLLCYLALNPK 6
           M+EM+EAR+  DV+ DWD LHELL CYL LNPK
Sbjct: 152 MLEMIEARKPRDVKADWDYLHELLSCYLNLNPK 184


>ref|XP_002314697.1| predicted protein [Populus trichocarpa] gi|222863737|gb|EEF00868.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/97 (55%), Positives = 72/97 (74%)
 Frame = -3

Query: 293 TSKPPDFSTILASQRFFIASPGHSNSIVDSTDSNYLPEPEALIAGGIPIRTHSPNPYIDF 114
           T   PDF+TI+ASQRFF +SPG SNSI++S    + P     ++GG+ I+ +S +PYIDF
Sbjct: 84  TDSTPDFATIIASQRFFSSSPGRSNSIIESMQELHTP-----VSGGVAIKKYSLDPYIDF 138

Query: 113 RESMVEMVEARELFDVRGDWDGLHELLLCYLALNPKD 3
           + SM EM+EARE+ DVR +WD LHEL+ CYL LNPK+
Sbjct: 139 KNSMQEMIEAREIRDVRANWDYLHELISCYLKLNPKN 175


Top