BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040513
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_191479.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    66   3e-09
gb|AFK45533.1| unknown [Lotus japonicus]                               64   2e-08
ref|XP_003519928.1| PREDICTED: putative F-box/LRR-repeat protein...    63   2e-08
ref|NP_197379.1| F-box domain-containing protein [Arabidopsis th...    63   3e-08
ref|XP_003616471.1| F-box/LRR-repeat protein [Medicago truncatul...    63   3e-08

>ref|NP_191479.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75264308|sp|Q9LX51.1|FBL64_ARATH RecName:
           Full=F-box/LRR-repeat protein At3g59200
           gi|7801670|emb|CAB91590.1| putative protein [Arabidopsis
           thaliana] gi|26450835|dbj|BAC42525.1| unknown protein
           [Arabidopsis thaliana] gi|29028916|gb|AAO64837.1|
           At3g59200 [Arabidopsis thaliana]
           gi|332646367|gb|AEE79888.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 520

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
 Frame = +3

Query: 66  DRISYLPGPIQSHVLSFLPMEDAFRTSILSRQWR*VCFSLSNLTFDQHSFMQKKNSGD-- 239
           DRIS LP P+ SH+LSFLP ++A  TS+LS++WR +   ++NL FD   +   K   D  
Sbjct: 7   DRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFDDSDYQDGKPKSDVE 66

Query: 240 ----FADFVNQMLSHRDGSAIINFEVNNNDCMYPVSVPDLNAW 356
               F +FV+++L+ +   ++  F +  ++  Y V +  +  W
Sbjct: 67  LSRSFMEFVDRVLALQGNGSVNKFSLECSN--YDVDLARVTGW 107


>gb|AFK45533.1| unknown [Lotus japonicus]
          Length = 159

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
 Frame = +3

Query: 57  MEMDRISYLPGPIQSHVLSFLPMEDAFRTSILSRQWR*VCFSLSNLTFDQHSF-MQKKNS 233
           ME+DRIS LP  +  H+LSFLP + A  TS+LS++W+ +  S+  L FD  S+ +  K  
Sbjct: 1   MEVDRISMLPDEVLYHILSFLPTQIAASTSVLSKRWKPLWLSVPALFFDDRSYLLNDKPY 60

Query: 234 GDFADFVNQMLSHRDGSAIINFEVNNNDCMYPVSVPDLNAWEMCAV 371
             F  F+   +  RD   I  F +   D  +  SV +LN W   A+
Sbjct: 61  LYFTKFIYATILTRD-VPIRTFRLQCEDSHFNFSVSELNIWVNAAI 105


>ref|XP_003519928.1| PREDICTED: putative F-box/LRR-repeat protein At5g25860-like
           [Glycine max]
          Length = 513

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
 Frame = +3

Query: 45  KSIRMEMDRISYLPGPIQSHVLSFLPMEDAFRTSILSRQWR*VCFSLSNLTFDQHSFMQK 224
           K  R E DRIS LP  I  H++SFL  +DA +T ILS++W+ +C  L++LTF   S  + 
Sbjct: 158 KRRRDERDRISELPDCILMHIMSFLDTKDAVQTCILSKRWKDLCKCLTDLTF--RSPFRC 215

Query: 225 KNSGDFADFVNQMLSHR-DGSAIINFEVNNN 314
           K    F  FV+ +LS R D  +++N ++NN+
Sbjct: 216 KCKKYFRKFVSWVLSSRNDSCSLLNVDINNS 246


>ref|NP_197379.1| F-box domain-containing protein [Arabidopsis thaliana]
           gi|334187755|ref|NP_001190332.1| F-box domain-containing
           protein [Arabidopsis thaliana]
           gi|357528794|sp|Q56YH2.2|FBD41_ARATH RecName:
           Full=FBD-associated F-box protein At5g18780
           gi|332005227|gb|AED92610.1| F-box domain-containing
           protein [Arabidopsis thaliana]
           gi|332005228|gb|AED92611.1| F-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 441

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/93 (37%), Positives = 53/93 (56%)
 Frame = +3

Query: 66  DRISYLPGPIQSHVLSFLPMEDAFRTSILSRQWR*VCFSLSNLTFDQHSFMQKKNSGDFA 245
           DRIS LP P+  H+LSFL  +D+ RTS+LS +WR +   +  L  D+  F     S   A
Sbjct: 11  DRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRLDLDKSDFSDDNPS---A 67

Query: 246 DFVNQMLSHRDGSAIINFEVNNNDCMYPVSVPD 344
            FV++ L+ R  S +  F++N +  +Y +S  D
Sbjct: 68  SFVDKFLNFRGESYLRGFKLNTDHDVYDISTLD 100


>ref|XP_003616471.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355517806|gb|AES99429.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 459

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
 Frame = +3

Query: 45  KSIRMEMDRISYLPGPIQSHVLSFLPMEDAFRTSILSRQWR*VCFSLSNLTFDQH--SFM 218
           + +  ++DRIS LP  + +++LSFLP +DA  TS+LS +W  +      L F  H  SF+
Sbjct: 26  RKVERQVDRISRLPNEVIAYILSFLPTKDAITTSVLSHRWISLWTFADALHFPNHCPSFL 85

Query: 219 QKKNSGDFADFVNQMLSHRDGSAI--INFEVNNNDCMYP 329
            K+N   F D +N +LS R+   I  ++F + NN C  P
Sbjct: 86  TKEN---FVDIMNSVLSQRESKCIKRLSFSILNN-CYIP 120