BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040507
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containi...    55   8e-06

>ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Vitis vinifera]
          Length = 1101

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
 Frame = -3

Query: 248 ILSRGIVP-------LLLCYRLW*YV--IVVYVDGLFRIGSLP---ACNVLLNGLCTEER 105
           +++RGI+P       +++CY     +   + + D LF + S P   ACN +L  LC  ER
Sbjct: 119 VIARGIIPDSETLNSMVICYCNLGKLEEAMAHFDRLFEVDSFPCKPACNAMLRELCARER 178

Query: 104 VLEAFTIFNKMVSVVVYLSLWCYN 33
           VLEAF  F ++  V + + LWC+N
Sbjct: 179 VLEAFDYFVRINDVGILMGLWCFN 202