BLASTX nr result

ID: Coptis25_contig00040489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040489
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79831.1| hypothetical protein VITISV_041029 [Vitis vinifera]   246   5e-63
ref|XP_002281016.2| PREDICTED: protein PLASTID MOVEMENT IMPAIRED...   246   6e-63
emb|CBI33618.3| unnamed protein product [Vitis vinifera]              246   6e-63
ref|XP_002528078.1| Myosin heavy chain, putative [Ricinus commun...   225   9e-57
ref|XP_003520017.1| PREDICTED: protein PLASTID MOVEMENT IMPAIRED...   217   3e-54

>emb|CAN79831.1| hypothetical protein VITISV_041029 [Vitis vinifera]
          Length = 752

 Score =  246 bits (628), Expect = 5e-63
 Identities = 132/250 (52%), Positives = 188/250 (75%)
 Frame = +3

Query: 57  KPSSRARELHMAKKDIRQYSEDIKVAEDMRFQAESELFSANKTVKDLNRRIEESKFRART 236
           KPSS AREL +A++DI ++SE  + A+ M+ +AESELF+A KTV+ L+  I ESK  A+ 
Sbjct: 125 KPSSIARELLLARRDIGRFSESRRAADSMKIEAESELFNAKKTVRTLSSLINESK--AKA 182

Query: 237 RKKELETLKRPERIEGGRALAVAEGENYQYAQVMRELESVKQDLSKLKLDMACLLENKSR 416
           + ++LE +K+PE+ E GRA  V + ENYQYA+VM+E+E +KQ+LSKLKLDMA +LE KSR
Sbjct: 183 KMQDLEDIKKPEKREEGRASDVGKAENYQYAEVMKEVEXMKQELSKLKLDMASVLEEKSR 242

Query: 417 VEKETEASTSRLRSHSNSIEGLKQEIEEANEEQVLVKLARMEAVKEFEAIEAEREAKETK 596
            EKE EA++S++ S+ +S   LK+EIEEANE+QVLV+LAR+EAVKE  AIEA+RE +  +
Sbjct: 243 AEKEIEAASSKIWSYGSSANSLKKEIEEANEDQVLVELARIEAVKELVAIEAQREKEANE 302

Query: 597 FTSTMEKTRKKIKELMRDIDRTKELEAKLAKTAYDADVLQNELRPVRAMSGSFSSERNET 776
           F+S MEKTRKK+ +++++I+++K+LE KL+ T  D DVLQNEL+  + +     S +N  
Sbjct: 303 FSSAMEKTRKKMSDIIQEIEQSKDLETKLSVTTSDIDVLQNELKLAKKID---KSVQNND 359

Query: 777 SGESAKGKQR 806
           S +  KG  R
Sbjct: 360 SLKHTKGSFR 369


>ref|XP_002281016.2| PREDICTED: protein PLASTID MOVEMENT IMPAIRED 2-like [Vitis
           vinifera]
          Length = 639

 Score =  246 bits (627), Expect = 6e-63
 Identities = 132/250 (52%), Positives = 188/250 (75%)
 Frame = +3

Query: 57  KPSSRARELHMAKKDIRQYSEDIKVAEDMRFQAESELFSANKTVKDLNRRIEESKFRART 236
           KPSS AREL +A++DI ++SE  + A+ M+ +AESELF+A KTV+ L+  I ESK  A+ 
Sbjct: 43  KPSSIARELLLARRDIGRFSESRRAADSMKIEAESELFNAKKTVRTLSSLINESK--AKA 100

Query: 237 RKKELETLKRPERIEGGRALAVAEGENYQYAQVMRELESVKQDLSKLKLDMACLLENKSR 416
           + ++LE +K+PE+ E GRA  V + ENYQYA+VM+E+E +KQ+LSKLKLDMA +LE KSR
Sbjct: 101 KMQDLEDIKKPEKREEGRASDVGKAENYQYAEVMKEVELMKQELSKLKLDMASVLEEKSR 160

Query: 417 VEKETEASTSRLRSHSNSIEGLKQEIEEANEEQVLVKLARMEAVKEFEAIEAEREAKETK 596
            EKE EA++S++ S+ +S   LK+EIEEANE+QVLV+LAR+EAVKE  AIEA+RE +  +
Sbjct: 161 AEKEIEAASSKIWSYGSSANSLKKEIEEANEDQVLVELARIEAVKELVAIEAQREKEANE 220

Query: 597 FTSTMEKTRKKIKELMRDIDRTKELEAKLAKTAYDADVLQNELRPVRAMSGSFSSERNET 776
           F+S MEKTRKK+ +++++I+++K+LE KL+ T  D DVLQNEL+  + +     S +N  
Sbjct: 221 FSSAMEKTRKKMSDIIQEIEQSKDLETKLSVTTSDIDVLQNELKLAKKID---KSVQNND 277

Query: 777 SGESAKGKQR 806
           S +  KG  R
Sbjct: 278 SLKHTKGSFR 287


>emb|CBI33618.3| unnamed protein product [Vitis vinifera]
          Length = 363

 Score =  246 bits (627), Expect = 6e-63
 Identities = 132/250 (52%), Positives = 188/250 (75%)
 Frame = +3

Query: 57  KPSSRARELHMAKKDIRQYSEDIKVAEDMRFQAESELFSANKTVKDLNRRIEESKFRART 236
           KPSS AREL +A++DI ++SE  + A+ M+ +AESELF+A KTV+ L+  I ESK  A+ 
Sbjct: 95  KPSSIARELLLARRDIGRFSESRRAADSMKIEAESELFNAKKTVRTLSSLINESK--AKA 152

Query: 237 RKKELETLKRPERIEGGRALAVAEGENYQYAQVMRELESVKQDLSKLKLDMACLLENKSR 416
           + ++LE +K+PE+ E GRA  V + ENYQYA+VM+E+E +KQ+LSKLKLDMA +LE KSR
Sbjct: 153 KMQDLEDIKKPEKREEGRASDVGKAENYQYAEVMKEVELMKQELSKLKLDMASVLEEKSR 212

Query: 417 VEKETEASTSRLRSHSNSIEGLKQEIEEANEEQVLVKLARMEAVKEFEAIEAEREAKETK 596
            EKE EA++S++ S+ +S   LK+EIEEANE+QVLV+LAR+EAVKE  AIEA+RE +  +
Sbjct: 213 AEKEIEAASSKIWSYGSSANSLKKEIEEANEDQVLVELARIEAVKELVAIEAQREKEANE 272

Query: 597 FTSTMEKTRKKIKELMRDIDRTKELEAKLAKTAYDADVLQNELRPVRAMSGSFSSERNET 776
           F+S MEKTRKK+ +++++I+++K+LE KL+ T  D DVLQNEL+  + +     S +N  
Sbjct: 273 FSSAMEKTRKKMSDIIQEIEQSKDLETKLSVTTSDIDVLQNELKLAKKID---KSVQNND 329

Query: 777 SGESAKGKQR 806
           S +  KG  R
Sbjct: 330 SLKHTKGSFR 339


>ref|XP_002528078.1| Myosin heavy chain, putative [Ricinus communis]
           gi|223532539|gb|EEF34328.1| Myosin heavy chain, putative
           [Ricinus communis]
          Length = 650

 Score =  225 bits (574), Expect = 9e-57
 Identities = 122/249 (48%), Positives = 178/249 (71%)
 Frame = +3

Query: 63  SSRARELHMAKKDIRQYSEDIKVAEDMRFQAESELFSANKTVKDLNRRIEESKFRARTRK 242
           SSRA+ELH+AK+++ +Y E  K+AE ++ QAESEL  A KTVKDL  +IEES  + + R 
Sbjct: 45  SSRAKELHLAKRNMARYKESRKIAESVKNQAESELSKARKTVKDLALQIEESNSQVKARV 104

Query: 243 KELETLKRPERIEGGRALAVAEGENYQYAQVMRELESVKQDLSKLKLDMACLLENKSRVE 422
           +++ETLK+  + EG      +   ++QYA++ +ELE VK++LSKLKLDMA +LE KSR E
Sbjct: 105 RDVETLKKSSKREGKGLDIKSSESHHQYAEMKKELELVKEELSKLKLDMASVLEEKSRAE 164

Query: 423 KETEASTSRLRSHSNSIEGLKQEIEEANEEQVLVKLARMEAVKEFEAIEAEREAKETKFT 602
           KE E+S+S+L  + +S++ L++EIEE NEE VL +LAR+EA+KEFE I+A+RE + ++F+
Sbjct: 165 KEIESSSSKLLPNLSSVDALRKEIEEVNEEHVLAELARIEALKEFEEIQAQREEEASEFS 224

Query: 603 STMEKTRKKIKELMRDIDRTKELEAKLAKTAYDADVLQNELRPVRAMSGSFSSERNETSG 782
             MEKTR+K+K    +ID +KEL++KLA T  D DVLQNEL+ V+ +       RN++  
Sbjct: 225 IEMEKTREKMKVANEEIDHSKELQSKLAVTLTDVDVLQNELKVVKEIEKKVL--RNDSLK 282

Query: 783 ESAKGKQRT 809
            S    QR+
Sbjct: 283 HSGGSFQRS 291


>ref|XP_003520017.1| PREDICTED: protein PLASTID MOVEMENT IMPAIRED 2-like [Glycine max]
          Length = 620

 Score =  217 bits (552), Expect = 3e-54
 Identities = 115/230 (50%), Positives = 162/230 (70%)
 Frame = +3

Query: 57  KPSSRARELHMAKKDIRQYSEDIKVAEDMRFQAESELFSANKTVKDLNRRIEESKFRART 236
           KPSSR RELH A++DI +Y E    AE +  QAE EL +A KT + L+  IEES ++A+T
Sbjct: 25  KPSSRTRELHRARRDIGRYKESKWTAESVTAQAEPELSNAKKTAEHLSSMIEESSYKAKT 84

Query: 237 RKKELETLKRPERIEGGRALAVAEGENYQYAQVMRELESVKQDLSKLKLDMACLLENKSR 416
           +  ++E+L++  + + G  +     ENY+YAQVMRELE +K++L KLKLD+A +++ KSR
Sbjct: 85  QMIDVESLEKRGKSQHGAIVVAKRNENYEYAQVMRELEYLKKELFKLKLDVASVMDQKSR 144

Query: 417 VEKETEASTSRLRSHSNSIEGLKQEIEEANEEQVLVKLARMEAVKEFEAIEAEREAKETK 596
            EKE EAS S++ S   + E L++EIEEANEEQVL +LAR+EA KE   IEA+RE +  +
Sbjct: 145 AEKEIEASNSKMLSCLTTAEELRREIEEANEEQVLAELARIEASKELADIEAQREKEANQ 204

Query: 597 FTSTMEKTRKKIKELMRDIDRTKELEAKLAKTAYDADVLQNELRPVRAMS 746
           F+  +E  R+K+KE + +ID +KELE KLA T  D D LQNEL+ V+ M+
Sbjct: 205 FSFNLEIARRKLKEAIEEIDESKELEMKLAVTISDVDFLQNELKSVKDMN 254


Top