BLASTX nr result

ID: Coptis25_contig00040481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040481
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169392.1| PREDICTED: uncharacterized LOC101204887 [Cuc...   135   3e-30
ref|XP_004149986.1| PREDICTED: uncharacterized protein LOC101204...   135   3e-30
emb|CBI17457.3| unnamed protein product [Vitis vinifera]              127   9e-28
ref|XP_002268828.1| PREDICTED: uncharacterized protein LOC100260...   127   9e-28
ref|XP_002521520.1| conserved hypothetical protein [Ricinus comm...   122   3e-26

>ref|XP_004169392.1| PREDICTED: uncharacterized LOC101204887 [Cucumis sativus]
          Length = 513

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/140 (45%), Positives = 88/140 (62%), Gaps = 17/140 (12%)
 Frame = +2

Query: 2   GVYFYCKTCSMKLTRTRLRSFVELPSANWREVADNWFGACCCSFGGISEKLVKQYDNSYI 181
           GV+FYC+ CS +L+++ LR FVE+PS NWREVADNWFG+CCCSFGGISEKLV +Y NSY 
Sbjct: 145 GVHFYCRNCSFRLSKSPLRDFVEMPSVNWREVADNWFGSCCCSFGGISEKLVNRYTNSYR 204

Query: 182 FSKGTCLLDASSAVISNEDLAEHVFP-----------------DCVSQSEENGVLHDSFG 310
             KG CLL  ++  +S +DL  HVFP                 DC+++++E    + +  
Sbjct: 205 CEKGVCLLTLTTITLSKDDLIGHVFPDNEGTQQLKDESDFADGDCLTEAKEESPCNHTST 264

Query: 311 ENNLSKYVMTSNLSEHVTGS 370
           E   SK +   +L  ++ GS
Sbjct: 265 EKVKSKQINNKSLYANMEGS 284


>ref|XP_004149986.1| PREDICTED: uncharacterized protein LOC101204887 [Cucumis sativus]
          Length = 556

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/140 (45%), Positives = 88/140 (62%), Gaps = 17/140 (12%)
 Frame = +2

Query: 2   GVYFYCKTCSMKLTRTRLRSFVELPSANWREVADNWFGACCCSFGGISEKLVKQYDNSYI 181
           GV+FYC+ CS +L+++ LR FVE+PS NWREVADNWFG+CCCSFGGISEKLV +Y NSY 
Sbjct: 145 GVHFYCRNCSFRLSKSPLRDFVEMPSVNWREVADNWFGSCCCSFGGISEKLVNRYTNSYR 204

Query: 182 FSKGTCLLDASSAVISNEDLAEHVFP-----------------DCVSQSEENGVLHDSFG 310
             KG CLL  ++  +S +DL  HVFP                 DC+++++E    + +  
Sbjct: 205 CEKGVCLLTLTTITLSKDDLIGHVFPDNEGTQQLKDESDFADGDCLTEAKEESPCNHTST 264

Query: 311 ENNLSKYVMTSNLSEHVTGS 370
           E   SK +   +L  ++ GS
Sbjct: 265 EKVKSKQINNKSLYANMEGS 284


>emb|CBI17457.3| unnamed protein product [Vitis vinifera]
          Length = 769

 Score =  127 bits (319), Expect = 9e-28
 Identities = 56/87 (64%), Positives = 67/87 (77%)
 Frame = +2

Query: 2   GVYFYCKTCSMKLTRTRLRSFVELPSANWREVADNWFGACCCSFGGISEKLVKQYDNSYI 181
           GV+FYCK+CS  LT+  L SF E+PS NWREVADNWFGACCCSFGGISEKLV +Y NSY 
Sbjct: 396 GVHFYCKSCSTNLTKKPLSSFAEMPSINWREVADNWFGACCCSFGGISEKLVARYANSYS 455

Query: 182 FSKGTCLLDASSAVISNEDLAEHVFPD 262
             + +CLLDA+S ++  +DL    FPD
Sbjct: 456 CGEESCLLDATSVILCKDDLVGFEFPD 482


>ref|XP_002268828.1| PREDICTED: uncharacterized protein LOC100260906 [Vitis vinifera]
          Length = 612

 Score =  127 bits (319), Expect = 9e-28
 Identities = 56/87 (64%), Positives = 67/87 (77%)
 Frame = +2

Query: 2   GVYFYCKTCSMKLTRTRLRSFVELPSANWREVADNWFGACCCSFGGISEKLVKQYDNSYI 181
           GV+FYCK+CS  LT+  L SF E+PS NWREVADNWFGACCCSFGGISEKLV +Y NSY 
Sbjct: 143 GVHFYCKSCSTNLTKKPLSSFAEMPSINWREVADNWFGACCCSFGGISEKLVARYANSYS 202

Query: 182 FSKGTCLLDASSAVISNEDLAEHVFPD 262
             + +CLLDA+S ++  +DL    FPD
Sbjct: 203 CGEESCLLDATSVILCKDDLVGFEFPD 229


>ref|XP_002521520.1| conserved hypothetical protein [Ricinus communis]
           gi|223539198|gb|EEF40791.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 532

 Score =  122 bits (306), Expect = 3e-26
 Identities = 53/87 (60%), Positives = 64/87 (73%)
 Frame = +2

Query: 5   VYFYCKTCSMKLTRTRLRSFVELPSANWREVADNWFGACCCSFGGISEKLVKQYDNSYIF 184
           V+FYC++CS +LT   LR FVELPS NWRE ADNWFGACCCSFGGISEKLV +Y ++Y  
Sbjct: 140 VHFYCRSCSTRLTANPLRHFVELPSVNWRETADNWFGACCCSFGGISEKLVNRYADAYTC 199

Query: 185 SKGTCLLDASSAVISNEDLAEHVFPDC 265
           +KG CLL   +  +  +DL E  F DC
Sbjct: 200 AKGVCLLSPPAVTLCKDDLVECKFVDC 226


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